Variant report

Variant	rs6927658
Chromosome Location	chr6:120969870-120969871
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 55 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs11153945	0.86[ASN][1000 genomes]
rs12208169	1.00[EUR][1000 genomes]
rs1320554	1.00[EUR][1000 genomes]
rs1933856	1.00[EUR][1000 genomes]
rs1933857	1.00[EUR][1000 genomes]
rs1933862	1.00[EUR][1000 genomes]
rs1933863	1.00[EUR][1000 genomes]
rs1933864	0.94[EUR][1000 genomes]
rs1933865	1.00[EUR][1000 genomes]
rs1933867	1.00[EUR][1000 genomes]
rs2095813	1.00[EUR][1000 genomes]
rs2095814	1.00[EUR][1000 genomes]
rs2095815	1.00[EUR][1000 genomes]
rs2105185	0.89[EUR][1000 genomes]
rs2358051	1.00[EUR][1000 genomes]
rs2358052	1.00[EUR][1000 genomes]
rs2358053	0.87[EUR][1000 genomes]
rs2358054	0.87[EUR][1000 genomes]
rs2358055	1.00[EUR][1000 genomes]
rs4245507	1.00[EUR][1000 genomes]
rs4256464	1.00[EUR][1000 genomes]
rs4275089	1.00[EUR][1000 genomes]
rs4330561	1.00[EUR][1000 genomes]
rs4394257	1.00[EUR][1000 genomes]
rs4516979	1.00[EUR][1000 genomes]
rs4548042	1.00[EUR][1000 genomes]
rs4624902	1.00[EUR][1000 genomes]
rs4645454	1.00[EUR][1000 genomes]
rs4946505	1.00[EUR][1000 genomes]
rs4946513	0.84[ASN][1000 genomes]
rs5017483	1.00[EUR][1000 genomes]
rs62442957	0.87[EUR][1000 genomes]
rs62442958	0.87[EUR][1000 genomes]
rs62444861	0.87[EUR][1000 genomes]
rs6901991	1.00[EUR][1000 genomes]
rs6902004	1.00[EUR][1000 genomes]
rs6902170	1.00[EUR][1000 genomes]
rs6910126	1.00[EUR][1000 genomes]
rs6910247	1.00[EUR][1000 genomes]
rs6910364	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6920772	1.00[EUR][1000 genomes]
rs6922392	1.00[EUR][1000 genomes]
rs6922409	1.00[EUR][1000 genomes]
rs7758280	0.84[ASN][1000 genomes]
rs9374959	1.00[EUR][1000 genomes]
rs9374960	0.94[EUR][1000 genomes]
rs9387874	1.00[EUR][1000 genomes]
rs9387875	1.00[EUR][1000 genomes]
rs9398604	0.84[ASN][1000 genomes]
rs9490023	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2753290	chr6:120309301-120979301	Enhancers Weak transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
2	esv2752474	chr6:120309301-120982301	Enhancers ZNF genes & repeats Weak transcription Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS	TF binding region Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
3	esv2757191	chr6:120967277-121029949	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv2759466	chr6:120967277-121029949	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv886586	chr6:120968061-121020821	ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:120969800-120970400	Enhancers	HMEC	breast

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