Variant report
| Variant | rs6931502 |
|---|---|
| Chromosome Location | chr6:24682541-24682542 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:24668200-24699800 | Weak transcription | Brain Substantia Nigra | brain |
| 2 | chr6:24668800-24691800 | Weak transcription | Psoas Muscle | Psoas |
| 3 | chr6:24669000-24686400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 4 | chr6:24669000-24690400 | Weak transcription | Gastric | stomach |
| 5 | chr6:24669000-24693000 | Weak transcription | Primary T cells from cord blood | blood |
| 6 | chr6:24669000-24701200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 7 | chr6:24669200-24686200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 8 | chr6:24669200-24690800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 9 | chr6:24669400-24687600 | Weak transcription | Left Ventricle | heart |
| 10 | chr6:24669400-24701600 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 11 | chr6:24671400-24687200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 12 | chr6:24674200-24700000 | Weak transcription | Fetal Lung | lung |
| 13 | chr6:24674600-24683600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 14 | chr6:24674600-24703400 | Weak transcription | Aorta | Aorta |
| 15 | chr6:24674800-24698200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 16 | chr6:24674800-24702200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 17 | chr6:24674800-24702200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 18 | chr6:24674800-24702600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 19 | chr6:24675000-24683800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 20 | chr6:24675600-24683400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 21 | chr6:24675800-24683600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 22 | chr6:24676600-24702600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 23 | chr6:24678200-24699600 | Weak transcription | Primary hematopoietic stem cells | blood |
| 24 | chr6:24678200-24702600 | Weak transcription | HSMMtube | muscle |
| 25 | chr6:24678800-24687000 | Weak transcription | Placenta | Placenta |
| 26 | chr6:24678800-24701200 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 27 | chr6:24678800-24701600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 28 | chr6:24679400-24700600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 29 | chr6:24679600-24699800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 30 | chr6:24679800-24691800 | Weak transcription | Right Ventricle | heart |
| 31 | chr6:24680000-24683400 | Weak transcription | HepG2 | liver |
| 32 | chr6:24680000-24705400 | Weak transcription | Colonic Mucosa | Colon |
| 33 | chr6:24680600-24702600 | Weak transcription | Primary B cells from peripheral blood | blood |
| 34 | chr6:24680800-24701600 | Weak transcription | Fetal Muscle Leg | muscle |
| 35 | chr6:24681200-24682600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 36 | chr6:24681200-24683400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 37 | chr6:24681200-24683600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 38 | chr6:24681200-24686600 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 39 | chr6:24681200-24687400 | Weak transcription | Liver | Liver |
| 40 | chr6:24681200-24705600 | Weak transcription | Ovary | ovary |
| 41 | chr6:24681400-24682600 | ZNF genes & repeats | Fetal Intestine Small | intestine |
| 42 | chr6:24681400-24701800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 43 | chr6:24681800-24682600 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 44 | chr6:24681800-24682800 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
| 45 | chr6:24681800-24682800 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 46 | chr6:24681800-24682800 | Strong transcription | Thymus | Thymus |
| 47 | chr6:24681800-24683000 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 48 | chr6:24682000-24682800 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 49 | chr6:24682200-24682800 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 50 | chr6:24682200-24682800 | ZNF genes & repeats | Fetal Stomach | stomach |
