Variant report

Variant	rs6934948
Chromosome Location	chr6:118203723-118203724
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs2788997	1.00[JPT][hapmap]
rs474078	1.00[ASN][1000 genomes]
rs478718	1.00[ASN][1000 genomes]
rs520888	1.00[ASN][1000 genomes]
rs57637403	1.00[ASN][1000 genomes]
rs6905052	1.00[AMR][1000 genomes]
rs73517528	1.00[ASN][1000 genomes]
rs73517530	1.00[ASN][1000 genomes]
rs7742492	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530526	chr6:118027339-118718476	Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:118202800-118204600	Enhancers	HUES64 Cell Line	embryonic stem cell
2	chr6:118203000-118204200	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr6:118203600-118204000	Weak transcription	HUES6 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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