Variant report

Variant rs6936598
Chromosome Location chr6:36626096-36626097
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:36611600-36628600 Weak transcription Right Atrium heart
2 chr6:36618200-36627400 Weak transcription Left Ventricle heart
3 chr6:36619400-36628400 Weak transcription Adipose Nuclei Adipose
4 chr6:36620200-36628000 Weak transcription Colonic Mucosa Colon
5 chr6:36620200-36628600 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr6:36620400-36626200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr6:36622000-36626200 Enhancers Fetal Thymus thymus
8 chr6:36622200-36628600 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr6:36622400-36628800 Enhancers GM12878-XiMat blood
10 chr6:36623200-36628600 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr6:36623400-36628800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr6:36623600-36626200 Weak transcription Primary B cells from cord blood blood
13 chr6:36624600-36627800 Enhancers Placenta Placenta
14 chr6:36624600-36628800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr6:36624800-36627400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr6:36625000-36626200 Enhancers Fetal Intestine Large intestine
17 chr6:36625000-36627600 Enhancers Rectal Smooth Muscle rectum
18 chr6:36625000-36628000 Enhancers Osteobl bone
19 chr6:36625000-36628200 Enhancers Colon Smooth Muscle Colon
20 chr6:36625000-36628800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr6:36625200-36627000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
22 chr6:36625200-36627200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr6:36625200-36627800 Enhancers HMEC breast
24 chr6:36625400-36626200 Enhancers Fetal Stomach stomach
25 chr6:36625400-36627400 Enhancers NHEK skin
26 chr6:36625600-36626400 Enhancers Primary B cells from peripheral blood blood
27 chr6:36625600-36626400 Enhancers NH-A brain
28 chr6:36625600-36627600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
29 chr6:36625600-36627600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr6:36625600-36627600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr6:36625600-36627600 Enhancers Muscle Satellite Cultured Cells --
32 chr6:36625600-36627800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr6:36625600-36627800 Enhancers HSMM muscle
34 chr6:36625600-36628000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr6:36625600-36628400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
36 chr6:36625600-36628800 Enhancers NHDF-Ad bronchial
37 chr6:36625800-36626400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr6:36625800-36627400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr6:36625800-36627800 Enhancers HSMMtube muscle
40 chr6:36625800-36628000 Weak transcription Fetal Intestine Small intestine
41 chr6:36625800-36628400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr6:36626000-36626200 Enhancers Ovary ovary
43 chr6:36626000-36626200 Enhancers Hela-S3 cervix
44 chr6:36626000-36627800 Enhancers NHLF lung
45 chr6:36626000-36628200 Enhancers Fetal Heart heart

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