Variant report

Variant	rs6941761
Chromosome Location	chr6:134369593-134369594
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:134362111..134364725-chr6:134368474..134372362,3	K562	blood:
2	chr6:134367426..134370394-chr6:134371254..134373715,3	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs55930220	1.00[EUR][1000 genomes]
rs6911375	1.00[CEU][hapmap]
rs73550586	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34122	chr6:134089019-134378252	Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:134350600-134370200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr6:134351600-134372400	Weak transcription	Right Ventricle	heart
3	chr6:134361000-134370000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr6:134362800-134372800	Weak transcription	K562	blood
5	chr6:134362800-134373200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr6:134363000-134370200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr6:134363000-134370200	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr6:134363000-134370200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr6:134363000-134372800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr6:134363000-134372800	Weak transcription	NHEK	skin
11	chr6:134363400-134370000	Weak transcription	HUES64 Cell Line	embryonic stem cell
12	chr6:134365400-134370600	Weak transcription	Fetal Intestine Small	intestine
13	chr6:134367200-134371800	Enhancers	Breast Myoepithelial Primary Cells	Breast
14	chr6:134368200-134371400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr6:134368200-134373200	Weak transcription	Thymus	Thymus
16	chr6:134368400-134369600	Enhancers	Brain Anterior Caudate	brain
17	chr6:134368600-134369600	Enhancers	Fetal Muscle Leg	muscle
18	chr6:134368600-134370600	Enhancers	Skeletal Muscle Male	skeletal muscle
19	chr6:134368800-134370200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr6:134368800-134371000	Enhancers	Brain Cingulate Gyrus	brain
21	chr6:134369000-134369600	Enhancers	Aorta	Aorta
22	chr6:134369000-134370200	Weak transcription	Brain Substantia Nigra	brain
23	chr6:134369000-134372600	Weak transcription	Stomach Smooth Muscle	stomach
24	chr6:134369200-134369600	Weak transcription	H1 Cell Line	embryonic stem cell
25	chr6:134369200-134370000	Weak transcription	Brain Inferior Temporal Lobe	brain
26	chr6:134369200-134370000	Weak transcription	Psoas Muscle	Psoas
27	chr6:134369200-134370200	Weak transcription	Brain Hippocampus Middle	brain
28	chr6:134369200-134370200	Weak transcription	Left Ventricle	heart
29	chr6:134369200-134371600	Weak transcription	Fetal Lung	lung
30	chr6:134369200-134372400	Weak transcription	HMEC	breast
31	chr6:134369200-134373000	Weak transcription	HSMMtube	muscle
32	chr6:134369200-134373200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr6:134369200-134373200	Weak transcription	Lung	lung
34	chr6:134369400-134370200	Weak transcription	Brain Angular Gyrus	brain
35	chr6:134369400-134370200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
36	chr6:134369400-134370400	Weak transcription	Right Atrium	heart
37	chr6:134369400-134372400	Weak transcription	Skeletal Muscle Female	skeletal muscle

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