Variant report

Variant	rs6947670
Chromosome Location	chr7:21378834-21378835
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs6947298	1.00[AMR][1000 genomes]
rs6974131	1.00[AMR][1000 genomes]
rs7796350	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3478244	chr7:21044211-21417347	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv3478245	chr7:21044211-21417347	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1016705	chr7:21257416-21450943	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:21377600-21379200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
2	chr7:21377600-21379800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
3	chr7:21377800-21379400	Enhancers	Primary T helper cells PMA-I stimulated	--
4	chr7:21377800-21379400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
5	chr7:21378200-21379000	Enhancers	Primary T cells from cord blood	blood
6	chr7:21378200-21379600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
7	chr7:21378400-21379000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr7:21378800-21379000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
9	chr7:21378800-21379000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr7:21378800-21379000	Enhancers	HUVEC	blood vessel

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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