Variant report

Variant	rs6956162
Chromosome Location	chr7:67264472-67264473
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10950088	0.84[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs11773150	0.84[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs1982711	0.81[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs4236216	0.84[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs4313042	0.84[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs4516996	0.84[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs4718625	0.84[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs6460398	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6956443	0.84[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs6959559	0.82[ASN][1000 genomes]
rs6980092	0.84[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs7777522	0.84[ASN][1000 genomes]
rs7781614	0.84[ASN][1000 genomes]
rs7782199	0.84[ASN][1000 genomes]
rs9647902	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1027532	chr7:67261526-67387398	Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:67262600-67265000	Enhancers	Adipose Nuclei	Adipose

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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