Variant report

Variant	rs6956656
Chromosome Location	chr7:128019747-128019748
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:127988066..127990303-chr7:128019597..128021947,2	MCF-7	breast:
2	chr7:128014128..128016101-chr7:128018729..128021356,2	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs13245629	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs880084	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831124	chr7:127970345-128147910	Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
2	nsv889191	chr7:127973133-128073326	Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
3	nsv608400	chr7:127978820-128048194	Weak transcription Strong transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	19 gene(s)	inside rSNPs	diseases
4	esv2493565	chr7:127985695-128053377	Weak transcription Flanking Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
5	esv3478325	chr7:127986726-128053483	Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
6	esv3478326	chr7:127986726-128053483	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:128002400-128044400	Weak transcription	Right Atrium	heart
2	chr7:128006800-128023400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr7:128018400-128024400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr7:128018600-128019800	Enhancers	Skeletal Muscle Female	skeletal muscle
5	chr7:128018600-128025000	Enhancers	Fetal Muscle Leg	muscle
6	chr7:128018800-128020000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr7:128018800-128021800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr7:128018800-128024600	Enhancers	Skeletal Muscle Male	skeletal muscle
9	chr7:128019000-128020000	Weak transcription	Fetal Thymus	thymus
10	chr7:128019000-128020600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr7:128019000-128021400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
12	chr7:128019000-128021400	Weak transcription	A549	lung
13	chr7:128019000-128023400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
14	chr7:128019000-128024600	Enhancers	Fetal Muscle Trunk	muscle
15	chr7:128019200-128020000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
16	chr7:128019200-128020600	Weak transcription	HUES6 Cell Line	embryonic stem cell
17	chr7:128019200-128020600	Weak transcription	Placenta Amnion	Placenta Amnion
18	chr7:128019200-128020800	Enhancers	Psoas Muscle	Psoas
19	chr7:128019200-128024200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr7:128019200-128024600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr7:128019400-128019800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr7:128019400-128024600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
23	chr7:128019600-128020000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
24	chr7:128019600-128021000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr7:128019600-128022400	Enhancers	HSMMtube	muscle

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