The 2.0 version of rSNPBase

Variant report

Variant rs6957590
Chromosome Location chr7:150097148-150097149
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:150077400-150100800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
2 chr7:150078000-150100600 Weak transcription Primary T helper cells PMA-I stimulated --
3 chr7:150078200-150097200 Weak transcription Muscle Satellite Cultured Cells --
4 chr7:150078200-150097200 Weak transcription HUVEC blood vessel
5 chr7:150080000-150100200 Weak transcription Primary T cells fromperipheralblood blood
6 chr7:150080200-150100200 Weak transcription Primary B cells from peripheral blood blood
7 chr7:150086400-150097200 Weak transcription Stomach Mucosa stomach
8 chr7:150086400-150100400 Weak transcription Brain Angular Gyrus brain
9 chr7:150086400-150100600 Weak transcription Fetal Brain Male brain
10 chr7:150086800-150101000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr7:150087000-150101200 Weak transcription Liver Liver
12 chr7:150088000-150100800 Weak transcription HSMMtube muscle
13 chr7:150088000-150101000 Weak transcription Primary hematopoietic stem cells blood
14 chr7:150088200-150101200 Weak transcription Fetal Kidney kidney
15 chr7:150088400-150097200 Weak transcription HSMM muscle
16 chr7:150091000-150100800 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr7:150091600-150101000 Weak transcription Rectal Smooth Muscle rectum
18 chr7:150091600-150101400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr7:150092600-150097600 Strong transcription Fetal Intestine Small intestine
20 chr7:150092600-150097800 Strong transcription Fetal Stomach stomach
21 chr7:150092800-150097200 Strong transcription Cortex derived primary cultured neurospheres brain
22 chr7:150092800-150097200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr7:150092800-150097800 Strong transcription Fetal Brain Female brain
24 chr7:150092800-150098200 Strong transcription Fetal Muscle Leg muscle
25 chr7:150092800-150099600 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr7:150093000-150097200 Strong transcription Brain Anterior Caudate brain
27 chr7:150093200-150097600 Strong transcription Thymus Thymus
28 chr7:150093200-150100800 Weak transcription Primary T regulatory cells fromperipheralblood blood
29 chr7:150093400-150097200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr7:150093400-150100400 Weak transcription Primary B cells from cord blood blood
31 chr7:150094400-150097200 Strong transcription Brain Substantia Nigra brain
32 chr7:150095000-150097200 Enhancers Fetal Heart heart
33 chr7:150095400-150097200 Enhancers Breast Myoepithelial Primary Cells Breast
34 chr7:150095400-150097400 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr7:150095600-150097200 Weak transcription Gastric stomach
36 chr7:150095600-150098000 Enhancers HMEC breast
37 chr7:150095600-150101000 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr7:150095600-150101600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
39 chr7:150095600-150101600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
40 chr7:150095600-150101600 Weak transcription Aorta Aorta
41 chr7:150095800-150097200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
42 chr7:150095800-150097200 Enhancers Placenta Amnion Placenta Amnion
43 chr7:150095800-150098000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr7:150095800-150101000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr7:150095800-150101600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr7:150095800-150101800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr7:150096000-150098000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr7:150096000-150098600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
49 chr7:150096000-150099600 Enhancers HUES6 Cell Line embryonic stem cell
50 chr7:150096000-150100600 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015