Variant report
| Variant | rs6965338 |
|---|---|
| Chromosome Location | chr7:126916531-126916532 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:9)
| rs_ID | r2[population] |
|---|---|
| rs11980484 | 0.81[CEU][hapmap];0.97[YRI][hapmap] |
| rs12706771 | 0.81[CEU][hapmap] |
| rs13231840 | 0.81[CEU][hapmap] |
| rs1592377 | 0.81[CEU][hapmap] |
| rs17863254 | 0.81[CEU][hapmap] |
| rs6948480 | 0.81[CEU][hapmap] |
| rs6954027 | 0.81[CEU][hapmap] |
| rs7792594 | 0.81[CEU][hapmap] |
| rs7797935 | 0.81[CEU][hapmap] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv889189 | chr7:126699088-126963028 | Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
