Variant report

Variant	rs6965483
Chromosome Location	chr7:48704938-48704939
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs57661039	0.86[ASN][1000 genomes]
rs6943139	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6948693	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6948980	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6958619	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73096462	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs73096463	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs73096464	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs73096466	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs73096468	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs73096469	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs73096470	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs73096471	0.86[ASN][1000 genomes]
rs73098417	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs73098424	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs73098427	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs73098432	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs73098438	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs73098439	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs73098440	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs73098442	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs73098443	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs73098446	1.00[AFR][1000 genomes]
rs73098447	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs73098449	0.86[ASN][1000 genomes]
rs7796476	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs7801171	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs7801477	1.00[AFR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv606894	chr7:48663637-48718598	ZNF genes & repeats Weak transcription Strong transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:48704800-48706200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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