Variant report

Variant rs697105
Chromosome Location chr5:53316271-53316272
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:53299200-53318000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr5:53309800-53317600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr5:53310000-53317200 Weak transcription Monocytes-CD14+_RO01746 blood
4 chr5:53310400-53318000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr5:53310600-53317400 Weak transcription Osteobl bone
6 chr5:53310600-53318000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr5:53310600-53318000 Weak transcription Primary T cells fromperipheralblood blood
8 chr5:53310600-53336000 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr5:53310800-53317400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr5:53310800-53317400 Weak transcription K562 blood
11 chr5:53310800-53318000 Weak transcription Fetal Intestine Large intestine
12 chr5:53311000-53317800 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr5:53311200-53317400 Weak transcription Fetal Intestine Small intestine
14 chr5:53311400-53317200 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr5:53311600-53316400 Enhancers iPS-15b Cell Line embryonic stem cell
16 chr5:53311600-53316600 Enhancers iPS-18 Cell Line embryonic stem cell
17 chr5:53311600-53317200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr5:53311600-53318000 Weak transcription Spleen Spleen
19 chr5:53311800-53317800 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr5:53312000-53317400 Weak transcription Primary hematopoietic stem cells blood
21 chr5:53312000-53317800 Weak transcription Adipose Nuclei Adipose
22 chr5:53313000-53317400 Weak transcription Primary T cells from cord blood blood
23 chr5:53313400-53317400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr5:53313400-53317600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr5:53313800-53317400 Weak transcription Primary monocytes fromperipheralblood blood
26 chr5:53314600-53316400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
27 chr5:53314600-53321800 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr5:53315000-53317800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr5:53315200-53316400 Enhancers HUES6 Cell Line embryonic stem cell
30 chr5:53315200-53316600 Enhancers HUES48 Cell Line embryonic stem cell
31 chr5:53315200-53316600 Enhancers HUES64 Cell Line embryonic stem cell
32 chr5:53315400-53316400 Enhancers iPS-20b Cell Line embryonic stem cell
33 chr5:53315600-53316600 Enhancers ES-I3 Cell Line embryonic stem cell
34 chr5:53315600-53316600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr5:53315800-53316400 Enhancers H1 Cell Line embryonic stem cell
36 chr5:53316000-53316400 Enhancers H9 Cell Line embryonic stem cell
37 chr5:53316000-53316400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
38 chr5:53316000-53316400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
39 chr5:53316000-53316400 ZNF genes & repeats Primary B cells from cord blood blood
40 chr5:53316000-53316800 Enhancers Dnd41 blood
41 chr5:53316000-53317400 Enhancers Primary hematopoietic stem cells short term culture blood
42 chr5:53316200-53316400 Enhancers Right Ventricle heart
43 chr5:53316200-53316600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr5:53316200-53317000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr5:53316200-53317400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr5:53316200-53335200 Weak transcription Gastric stomach
47 chr5:53316200-53387400 Weak transcription Left Ventricle heart

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