Variant report

Variant	rs6972034
Chromosome Location	chr7:104017717-104017718
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs10487202	1.00[ASW][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv608067	chr7:103944237-104029408	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs6972034	DLD	cis	cerebellum	SCAN
rs6972034	C7orf61	cis	parietal	SCAN

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:104016800-104018200	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr7:104017000-104018200	Enhancers	H1 Cell Line	embryonic stem cell
3	chr7:104017400-104018000	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr7:104017400-104018200	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr7:104017600-104017800	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr7:104017600-104018200	Enhancers	HUES6 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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