Variant report

Variant	rs6972357
Chromosome Location	chr7:79765361-79765362
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs17153492	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429785	chr7:79589749-80177049	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:79762800-79765800	Active TSS	Stomach Smooth Muscle	stomach
2	chr7:79763200-79765600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr7:79763200-79766000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
4	chr7:79763200-79766200	Active TSS	iPS-15b Cell Line	embryonic stem cell
5	chr7:79763200-79766400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr7:79763200-79767000	Active TSS	ES-I3 Cell Line	embryonic stem cell
7	chr7:79763200-79767000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
8	chr7:79763400-79765800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr7:79763400-79765800	Active TSS	Fetal Intestine Large	intestine
10	chr7:79763400-79765800	Active TSS	Rectal Smooth Muscle	rectum
11	chr7:79763400-79766000	Active TSS	H9 Cell Line	embryonic stem cell
12	chr7:79763400-79766000	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr7:79763400-79766000	Active TSS	Fetal Lung	lung
14	chr7:79763400-79766200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr7:79763400-79766200	Active TSS	Colon Smooth Muscle	Colon
16	chr7:79763400-79766200	Active TSS	Pancreatic Islets	Pancreatic Islet
17	chr7:79763400-79766400	Active TSS	Duodenum Smooth Muscle	Duodenum
18	chr7:79763400-79766600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr7:79763400-79767000	Active TSS	HUES6 Cell Line	embryonic stem cell
20	chr7:79763400-79767400	Active TSS	Brain Angular Gyrus	brain
21	chr7:79763600-79765400	Flanking Active TSS	Primary B cells from cord blood	blood
22	chr7:79763600-79765400	Active TSS	Gastric	stomach
23	chr7:79763600-79765400	Active TSS	Lung	lung
24	chr7:79763600-79765600	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
25	chr7:79763600-79765600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr7:79763600-79765600	Active TSS	HUES48 Cell Line	embryonic stem cell
27	chr7:79763600-79765600	Active TSS	Esophagus	oesophagus
28	chr7:79763600-79765600	Active TSS	Left Ventricle	heart
29	chr7:79763600-79765600	Active TSS	Placenta Amnion	Placenta Amnion
30	chr7:79763600-79765800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
31	chr7:79763600-79765800	Active TSS	HUES64 Cell Line	embryonic stem cell
32	chr7:79763600-79765800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr7:79763600-79765800	Active TSS	Fetal Intestine Small	intestine
34	chr7:79763600-79765800	Active TSS	HepG2	liver
35	chr7:79763600-79765800	Active TSS	HSMMtube	muscle
36	chr7:79763600-79766000	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
37	chr7:79763600-79766000	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
38	chr7:79763600-79766000	Active TSS	Aorta	Aorta
39	chr7:79763600-79766000	Active TSS	Fetal Muscle Trunk	muscle
40	chr7:79763600-79766000	Active TSS	Right Ventricle	heart
41	chr7:79763600-79766000	Active TSS	NHDF-Ad	bronchial
42	chr7:79763600-79766200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
43	chr7:79763600-79766200	Active TSS	Ovary	ovary
44	chr7:79763600-79766200	Active TSS	Psoas Muscle	Psoas
45	chr7:79763600-79766400	Active TSS	Brain Substantia Nigra	brain
46	chr7:79763600-79766400	Active TSS	Right Atrium	heart
47	chr7:79763600-79767400	Active TSS	Brain Hippocampus Middle	brain
48	chr7:79763800-79765400	Active TSS	Primary T helper naive cells from peripheral blood	blood
49	chr7:79763800-79765400	Active TSS	Primary T killer naive cells fromperipheralblood	blood
50	chr7:79763800-79765400	Active TSS	Liver	Liver

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