The 2.0 version of rSNPBase

Variant report

Variant rs697573
Chromosome Location chr5:14761568-14761569
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:14729200-14791000 Weak transcription Small Intestine intestine
2 chr5:14741600-14767800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr5:14744600-14761800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr5:14744600-14775800 Weak transcription NH-A brain
5 chr5:14744800-14776000 Weak transcription Muscle Satellite Cultured Cells --
6 chr5:14746000-14790200 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr5:14746200-14762400 Weak transcription GM12878-XiMat blood
8 chr5:14746200-14775800 Weak transcription Spleen Spleen
9 chr5:14746400-14768000 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr5:14746600-14776000 Weak transcription Placenta Placenta
11 chr5:14749000-14776000 Weak transcription Esophagus oesophagus
12 chr5:14751200-14762400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr5:14751400-14761600 Weak transcription Primary B cells from peripheral blood blood
14 chr5:14751400-14775800 Weak transcription Pancreas Pancrea
15 chr5:14751600-14768000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr5:14752200-14776600 Weak transcription Stomach Smooth Muscle stomach
17 chr5:14753400-14775600 Weak transcription Lung lung
18 chr5:14753400-14777000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr5:14753600-14790000 Weak transcription Ovary ovary
20 chr5:14753600-14801600 Weak transcription Rectal Smooth Muscle rectum
21 chr5:14753800-14775800 Weak transcription Gastric stomach
22 chr5:14754400-14768000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr5:14754400-14768000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr5:14754800-14766800 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr5:14756000-14766000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr5:14756200-14764600 Weak transcription Hela-S3 cervix
27 chr5:14756400-14764600 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr5:14756600-14764400 Weak transcription Primary T cells fromperipheralblood blood
29 chr5:14756800-14779000 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr5:14756800-14780200 Weak transcription Fetal Stomach stomach
31 chr5:14756800-14781200 Weak transcription Thymus Thymus
32 chr5:14757400-14763400 Weak transcription Fetal Brain Male brain
33 chr5:14757400-14767000 Weak transcription Dnd41 blood
34 chr5:14757400-14775800 Weak transcription HMEC breast
35 chr5:14758400-14764200 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr5:14758600-14762400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr5:14758600-14762400 Weak transcription Fetal Brain Female brain
38 chr5:14758600-14768000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr5:14758800-14762400 Weak transcription Primary hematopoietic stem cells blood
40 chr5:14758800-14764400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr5:14758800-14764400 Weak transcription Fetal Intestine Large intestine
42 chr5:14758800-14764400 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr5:14758800-14767800 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr5:14758800-14783800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr5:14759200-14764800 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr5:14759200-14790200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr5:14759400-14764400 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr5:14759600-14762000 Enhancers Brain Hippocampus Middle brain
49 chr5:14759600-14763200 Enhancers Left Ventricle heart
50 chr5:14759600-14763200 Enhancers Psoas Muscle Psoas

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Last update: Aug 31, 2015