Variant report

Variant	rs6984071
Chromosome Location	chr8:2066751-2066752
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs34620424	0.86[AFR][1000 genomes]
rs7009629	1.00[AFR][1000 genomes]
rs7012527	0.93[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889712	chr8:1591412-2337777	Weak transcription Active TSS Strong transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:2023600-2067000	Weak transcription	Right Atrium	heart
2	chr8:2034600-2074200	Weak transcription	Fetal Heart	heart
3	chr8:2035000-2075000	Weak transcription	Brain Angular Gyrus	brain
4	chr8:2050000-2070000	Weak transcription	Psoas Muscle	Psoas
5	chr8:2053400-2074000	Strong transcription	Skeletal Muscle Female	skeletal muscle
6	chr8:2061800-2069400	Strong transcription	Skeletal Muscle Male	skeletal muscle
7	chr8:2063000-2074200	Strong transcription	Left Ventricle	heart
8	chr8:2065200-2066800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
9	chr8:2065200-2066800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
10	chr8:2065200-2067000	Enhancers	Primary T helper cells fromperipheralblood	blood
11	chr8:2065600-2067000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
12	chr8:2065600-2067400	Strong transcription	Fetal Muscle Leg	muscle
13	chr8:2065600-2068000	Strong transcription	Right Ventricle	heart
14	chr8:2066000-2066800	Enhancers	Primary T helper cells PMA-I stimulated	--
15	chr8:2066400-2066800	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
16	chr8:2066400-2066800	Enhancers	Fetal Kidney	kidney
17	chr8:2066400-2067000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
18	chr8:2066600-2066800	Bivalent Enhancer	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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