Variant report

Variant	rs6984919
Chromosome Location	chr8:60883992-60883993
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs7830095	1.00[AMR][1000 genomes]
rs7830982	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831331	chr8:60770382-60959633	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:60871600-60884800	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr8:60882200-60885000	Weak transcription	Dnd41	blood
3	chr8:60882400-60884600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
4	chr8:60882400-60885200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
5	chr8:60883400-60885600	Enhancers	Primary B cells from peripheral blood	blood
6	chr8:60883600-60885400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
7	chr8:60883600-60885600	Enhancers	Primary B cells from cord blood	blood
8	chr8:60883800-60884400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links