Variant report

Variant	rs6995724
Chromosome Location	chr8:104151829-104151830
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs7815185	0.87[AFR][1000 genomes]
rs7843955	0.84[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831413	chr8:104085141-104269789	Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	28 gene(s)	inside rSNPs	diseases
2	nsv429931	chr8:104097396-104878014	Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
3	esv1848810	chr8:104128496-104369288	Strong transcription Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
4	esv1844303	chr8:104128696-104369090	Genic enhancers Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:104146800-104152000	Weak transcription	Fetal Brain Male	brain
2	chr8:104146800-104152600	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr8:104148400-104152200	Enhancers	Brain Hippocampus Middle	brain
4	chr8:104149000-104153200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
5	chr8:104149600-104152200	Enhancers	Brain Angular Gyrus	brain
6	chr8:104150000-104152600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr8:104150200-104152200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr8:104150200-104152400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr8:104150200-104152600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr8:104150400-104152200	Enhancers	Brain Inferior Temporal Lobe	brain
11	chr8:104150600-104152800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
12	chr8:104150600-104152800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr8:104150800-104152200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
14	chr8:104150800-104152200	Weak transcription	Pancreas	Pancrea
15	chr8:104150800-104152200	Weak transcription	Right Ventricle	heart
16	chr8:104150800-104153000	Enhancers	Primary B cells from peripheral blood	blood
17	chr8:104151000-104152200	Enhancers	Cortex derived primary cultured neurospheres	brain
18	chr8:104151000-104152600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr8:104151000-104152600	Weak transcription	Ovary	ovary
20	chr8:104151200-104152000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
21	chr8:104151200-104152200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr8:104151400-104152000	Weak transcription	Spleen	Spleen
23	chr8:104151400-104153000	Enhancers	Primary B cells from cord blood	blood
24	chr8:104151600-104152200	Enhancers	Brain Anterior Caudate	brain
25	chr8:104151600-104152200	Enhancers	Brain Cingulate Gyrus	brain
26	chr8:104151600-104152400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
27	chr8:104151600-104152600	Weak transcription	Right Atrium	heart
28	chr8:104151800-104152200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr8:104151800-104152200	Weak transcription	Brain Substantia Nigra	brain
30	chr8:104151800-104152600	Active TSS	Primary hematopoietic stem cells	blood

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