Variant report

Variant	rs6996670
Chromosome Location	chr8:2157030-2157031
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs7009069	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889712	chr8:1591412-2337777	Weak transcription Active TSS Strong transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:2151600-2166800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
2	chr8:2151800-2157200	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr8:2151800-2158600	Weak transcription	Psoas Muscle	Psoas
4	chr8:2151800-2166800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
5	chr8:2152600-2162600	Weak transcription	Primary T helper cells PMA-I stimulated	--
6	chr8:2153400-2159000	Weak transcription	Pancreas	Pancrea

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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