Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11775755	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11783888	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11784846	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11785759	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11785919	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12542251	0.84[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs13276467	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1567303	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2136103	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs218011	0.86[AFR][1000 genomes];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs218012	0.95[ASN][1000 genomes]
rs218018	0.80[CEU][hapmap];0.80[CHB][hapmap];0.81[JPT][hapmap];0.89[YRI][hapmap];0.84[ASN][1000 genomes]
rs218023	0.84[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs2737419	0.84[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs28801782	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs34003801	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4876383	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4876734	0.87[EUR][1000 genomes]
rs6987749	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7018293	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs729929	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs735248	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1019636	chr8:118598433-118946091	Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv539734	chr8:118598433-118946091	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv831438	chr8:118679896-118823600	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv891410	chr8:118684994-118730344	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:118694600-118723800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr8:118702200-118724600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr8:118708600-118725200	Weak transcription	Ovary	ovary
4	chr8:118710400-118737200	Weak transcription	Aorta	Aorta
5	chr8:118714800-118725800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr8:118715800-118722600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr8:118718000-118725400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr8:118719200-118723000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr8:118719400-118724600	Weak transcription	Osteobl	bone
10	chr8:118719400-118724800	Weak transcription	NHDF-Ad	bronchial
11	chr8:118719800-118722600	Weak transcription	HSMMtube	muscle
12	chr8:118719800-118724800	Weak transcription	HSMM	muscle
13	chr8:118721000-118725400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr8:118722000-118724800	Enhancers	Breast Myoepithelial Primary Cells	Breast

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