Variant report

Variant	rs6999326
Chromosome Location	chr8:129879181-129879182
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:129872569..129876540-chr8:129878616..129881184,3	K562	blood:
2	chr8:129865860..129869579-chr8:129877876..129880689,4	K562	blood:
3	chr8:129878873..129881112-chr8:129881741..129884417,2	K562	blood:
4	chr8:129868858..129872488-chr8:129878808..129881369,3	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs7818017	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv517445	chr8:129859924-129881299	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:129874600-129886200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr8:129874800-129879200	Weak transcription	HMEC	breast
3	chr8:129874800-129879200	Weak transcription	NHEK	skin
4	chr8:129875000-129887000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr8:129876200-129886200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr8:129876400-129879400	Weak transcription	Fetal Stomach	stomach
7	chr8:129876800-129879200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr8:129877000-129885000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr8:129878600-129879800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr8:129878600-129880000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr8:129878800-129879800	Enhancers	NH-A	brain
12	chr8:129879000-129879400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr8:129879000-129879400	Enhancers	NHLF	lung
14	chr8:129879000-129879600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr8:129879000-129879600	Enhancers	Muscle Satellite Cultured Cells	--
16	chr8:129879000-129879800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr8:129879000-129880000	Enhancers	HSMM	muscle
18	chr8:129879000-129880200	Enhancers	NHDF-Ad	bronchial
19	chr8:129879000-129881400	Enhancers	Osteobl	bone
20	chr8:129879000-129881600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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