Variant report

Variant rs7002912
Chromosome Location chr8:86380223-86380224
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:86375400-86380600 Active TSS Colonic Mucosa Colon
2 chr8:86375400-86381000 Active TSS Brain Angular Gyrus brain
3 chr8:86376400-86380600 Active TSS Stomach Mucosa stomach
4 chr8:86377000-86394600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr8:86377200-86381000 Enhancers Primary monocytes fromperipheralblood blood
6 chr8:86377600-86380600 Active TSS Fetal Stomach stomach
7 chr8:86377600-86390800 Weak transcription Right Ventricle heart
8 chr8:86377600-86392600 Weak transcription Psoas Muscle Psoas
9 chr8:86377600-86395600 Weak transcription Primary B cells from peripheral blood blood
10 chr8:86377600-86399000 Weak transcription Fetal Heart heart
11 chr8:86377800-86380400 Weak transcription Fetal Intestine Small intestine
12 chr8:86377800-86381800 Enhancers Liver Liver
13 chr8:86377800-86388200 Weak transcription Adipose Nuclei Adipose
14 chr8:86377800-86388400 Weak transcription Lung lung
15 chr8:86377800-86390200 Weak transcription HMEC breast
16 chr8:86378000-86380400 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr8:86378000-86380800 Weak transcription Pancreas Pancrea
18 chr8:86378000-86382000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr8:86378000-86382000 Weak transcription Fetal Lung lung
20 chr8:86378000-86384200 Weak transcription Fetal Intestine Large intestine
21 chr8:86378000-86385600 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr8:86378000-86386600 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr8:86378000-86388400 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr8:86378000-86392800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr8:86378000-86392800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr8:86378000-86403000 Weak transcription Rectal Smooth Muscle rectum
27 chr8:86378200-86381000 Active TSS Brain Substantia Nigra brain
28 chr8:86378200-86387600 Weak transcription NHEK skin
29 chr8:86378200-86388400 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr8:86378200-86389400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr8:86378200-86390600 Weak transcription Brain Germinal Matrix brain
32 chr8:86378600-86387000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr8:86378800-86380600 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr8:86379000-86382400 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
35 chr8:86379000-86393000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr8:86379200-86380600 Enhancers GM12878-XiMat blood
37 chr8:86379400-86380600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
38 chr8:86379600-86380600 Enhancers Primary hematopoietic stem cells short term culture blood
39 chr8:86379600-86380600 Enhancers Duodenum Mucosa Duodenum
40 chr8:86379600-86387600 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr8:86380000-86380400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr8:86380000-86380400 Enhancers H9 Cell Line embryonic stem cell
43 chr8:86380000-86380400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr8:86380000-86380400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
45 chr8:86380000-86380400 Transcr. at gene 5' and 3' Brain Hippocampus Middle brain
46 chr8:86380000-86380400 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
47 chr8:86380000-86380400 Enhancers Small Intestine intestine
48 chr8:86380000-86380600 Enhancers iPS-15b Cell Line embryonic stem cell
49 chr8:86380000-86380600 Flanking Active TSS Brain Anterior Caudate brain
50 chr8:86380000-86380600 Flanking Active TSS Brain Cingulate Gyrus brain

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