Variant report

Variant	rs7003427
Chromosome Location	chr8:125821214-125821215
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs16900004	1.00[CEU][hapmap]
rs6997272	1.00[EUR][1000 genomes]
rs7002198	1.00[CEU][hapmap]
rs73340152	1.00[EUR][1000 genomes]
rs73349127	1.00[EUR][1000 genomes]
rs73349160	1.00[EUR][1000 genomes]
rs73349175	1.00[EUR][1000 genomes]
rs7461335	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs7464660	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs7829412	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891434	chr8:125630655-126324432	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
2	nsv1016502	chr8:125657664-125845074	Weak transcription Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:125813800-125822400	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr8:125815600-125821400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr8:125819000-125822200	Enhancers	Monocytes-CD14+_RO01746	blood
4	chr8:125819400-125822000	Enhancers	HSMMtube	muscle
5	chr8:125819800-125821600	Enhancers	Fetal Lung	lung
6	chr8:125820000-125822000	Enhancers	HSMM	muscle
7	chr8:125820000-125822400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr8:125820200-125822200	Enhancers	Osteobl	bone
9	chr8:125820600-125821600	Enhancers	Lung	lung
10	chr8:125820600-125821600	Enhancers	K562	blood
11	chr8:125820600-125821800	Enhancers	Left Ventricle	heart
12	chr8:125820800-125821600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr8:125821200-125821800	Enhancers	Primary neutrophils fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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