Variant report

Variant	rs7005300
Chromosome Location	chr8:104511208-104511209
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr8:104510816-104511357	SK-N-SH	brain:	n/a	n/a
2	SIN3A	chr8:104510669-104514416	H1-hESC	embryonic stem cell:	n/a	chr8:104512440-104512453 chr8:104512690-104512703 chr8:104512322-104512335 chr8:104514131-104514145 chr8:104511737-104511746 chr8:104511075-104511086 chr8:104514132-104514141
3	POLR2A	chr8:104511003-104511550	ECC-1	luminal epithelium:	n/a	n/a
4	CHD2	chr8:104510982-104511610	H1-hESC	embryonic stem cell:	n/a	chr8:104511042-104511052
5	MAX	chr8:104510929-104511644	A549	lung:	n/a	chr8:104511045-104511055
6	KAP1	chr8:104510793-104511435	HEK293	kidney:	n/a	n/a
7	E2F6	chr8:104510961-104511670	A549	lung:	n/a	chr8:104511230-104511247 chr8:104511044-104511053 chr8:104511234-104511245 chr8:104511234-104511249 chr8:104511237-104511244
8	CTCF	chr8:104511200-104511350	GM12864	blood:	n/a	n/a
9	CTCF	chr8:104511160-104511310	GM06990	blood:	n/a	n/a
10	TAF1	chr8:104511119-104511446	H1-hESC	embryonic stem cell:	n/a	n/a
11	E2F6	chr8:104511179-104511595	A549	lung:	n/a	chr8:104511230-104511247 chr8:104511234-104511245 chr8:104511234-104511249 chr8:104511237-104511244
12	MAX	chr8:104510510-104512074	HCT-116	colon:	n/a	chr8:104511715-104511725 chr8:104511045-104511055
13	YY1	chr8:104510742-104511495	HCT-116	colon:	n/a	chr8:104511103-104511112 chr8:104511044-104511053 chr8:104511071-104511080
14	POLR2A	chr8:104510722-104511846	HCT-116	colon:	n/a	n/a
15	POLR2A	chr8:104511122-104511220	Gliobla	brain:	n/a	n/a
16	SIN3AK20	chr8:104510940-104511815	H1-hESC	embryonic stem cell:	n/a	n/a
17	POLR2A	chr8:104510628-104512178	HCT-116	colon:	n/a	n/a
18	TBP	chr8:104511172-104511672	H1-hESC	embryonic stem cell:	n/a	n/a
19	MAX	chr8:104511103-104512351	H1-hESC	embryonic stem cell:	n/a	chr8:104511715-104511725
20	JUND	chr8:104510855-104511762	H1-hESC	embryonic stem cell:	n/a	chr8:104511470-104511479 chr8:104511040-104511049
21	POLR2A	chr8:104511110-104511529	H1-hESC	embryonic stem cell:	n/a	n/a
22	HA-E2F1	chr8:104510610-104511673	MCF-7	breast:	n/a	chr8:104511230-104511247 chr8:104511044-104511053 chr8:104511234-104511245 chr8:104511234-104511249 chr8:104511237-104511244
23	ZNF263	chr8:104510341-104512321	HEK293-T-REx	kidney:	n/a	chr8:104510771-104510780 chr8:104511611-104511620
24	RAD21	chr8:104511115-104511953	H1-hESC	embryonic stem cell:	n/a	n/a
25	CTBP2	chr8:104510977-104513239	H1-hESC	embryonic stem cell:	n/a	n/a
26	RAD21	chr8:104510859-104511958	H1-hESC	embryonic stem cell:	n/a	n/a
27	TAF1	chr8:104511098-104511562	H1-hESC	embryonic stem cell:	n/a	n/a
28	POLR2A	chr8:104511133-104511509	H1-hESC	embryonic stem cell:	n/a	n/a
29	TCF12	chr8:104510704-104512276	ECC-1	luminal epithelium:	n/a	chr8:104511704-104511711
30	MAX	chr8:104510619-104511995	MCF-7	breast:	n/a	chr8:104511715-104511725 chr8:104511045-104511055
31	POLR2A	chr8:104511151-104512401	H1-neurons	neurons:	n/a	n/a
32	MAX	chr8:104510638-104511931	ECC-1	luminal epithelium:	n/a	chr8:104511715-104511725 chr8:104511045-104511055
33	CTCF	chr8:104511200-104511350	AG10803	skin:	n/a	n/a
34	MAX	chr8:104510720-104511782	ECC-1	luminal epithelium:	n/a	chr8:104511715-104511725 chr8:104511045-104511055
35	ZBTB7A	chr8:104511086-104512177	ECC-1	luminal epithelium:	n/a	chr8:104511711-104511720
36	POLR2A	chr8:104510780-104513316	H1-neurons	neurons:	n/a	n/a
37	POLR2A	chr8:104510827-104511775	MCF-7	breast:	n/a	n/a
38	MAX	chr8:104510723-104511669	SK-N-SH	brain:	n/a	chr8:104511045-104511055
39	ZBTB7A	chr8:104510843-104513086	ECC-1	luminal epithelium:	n/a	chr8:104511711-104511720
40	TEAD4	chr8:104511200-104511618	H1-hESC	embryonic stem cell:	n/a	n/a
41	BACH1	chr8:104510832-104511723	H1-hESC	embryonic stem cell:	n/a	n/a
42	MXI1	chr8:104510187-104514952	SK-N-SH	brain:	n/a	n/a
43	MXI1	chr8:104510849-104511719	H1-hESC	embryonic stem cell:	n/a	n/a
44	TCF7L2	chr8:104510767-104512119	HCT-116	colon:	n/a	n/a
45	ZNF143	chr8:104510697-104511787	H1-hESC	embryonic stem cell:	n/a	chr8:104510876-104510895
46	MAX	chr8:104510679-104511741	A549	lung:	n/a	chr8:104511715-104511725 chr8:104511045-104511055
47	CTCF	chr8:104511200-104511350	HCT-116	colon:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:104424987..104428689-chr8:104510615..104514344,5	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SLC25A32-3	chr8:104511198-104511722	XLOC_007177
2	lnc-SLC25A32-3	chr8:104511115-104511783	NONHSAT128194
3	lnc-SLC25A32-3	chr8:104510404-104512975	NONHSAT128193

Variant related genes	Relation type
RIMS2	TF binding region
ENSG00000164934	Chromatin interaction
ENSG00000164933	Chromatin interaction

Extended variants
information (count: 211 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:200)

rs_ID	r²[population]
rs10046611	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10086572	0.81[AFR][1000 genomes]
rs10086733	0.81[AFR][1000 genomes]
rs10086828	0.84[AFR][1000 genomes]
rs10087778	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10089162	0.82[AFR][1000 genomes]
rs10089301	0.82[AFR][1000 genomes]
rs10089491	0.82[AFR][1000 genomes]
rs10090039	0.82[AFR][1000 genomes]
rs10090897	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10091058	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10091089	0.82[AFR][1000 genomes]
rs10091859	0.84[AFR][1000 genomes]
rs10093711	0.80[AFR][1000 genomes]
rs10093848	0.81[AFR][1000 genomes]
rs10094153	0.81[AFR][1000 genomes]
rs10096428	0.92[AFR][1000 genomes]
rs10097744	0.93[AFR][1000 genomes]
rs10098860	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10099408	0.80[AFR][1000 genomes]
rs10102124	0.81[AFR][1000 genomes]
rs10102523	0.81[AFR][1000 genomes]
rs10103024	0.84[AFR][1000 genomes]
rs10103086	0.84[AFR][1000 genomes]
rs10103311	0.82[AFR][1000 genomes]
rs10104009	0.82[AFR][1000 genomes]
rs10105191	0.84[AFR][1000 genomes]
rs10106319	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10107074	0.82[AFR][1000 genomes]
rs10110162	0.82[AFR][1000 genomes]
rs10110452	0.88[AFR][1000 genomes]
rs10112996	0.81[AFR][1000 genomes]
rs10113157	0.82[AFR][1000 genomes]
rs10505044	0.82[AFR][1000 genomes]
rs10505045	0.81[AFR][1000 genomes]
rs10505046	0.81[AFR][1000 genomes]
rs11776670	0.82[AFR][1000 genomes]
rs11776707	0.84[AFR][1000 genomes]
rs11778502	0.82[AFR][1000 genomes]
rs11784812	0.82[AFR][1000 genomes]
rs11785526	0.80[AFR][1000 genomes]
rs11787180	0.84[AFR][1000 genomes]
rs12114100	0.83[AFR][1000 genomes]
rs12334431	0.84[AFR][1000 genomes]
rs12334852	0.88[AFR][1000 genomes]
rs12334941	0.84[AFR][1000 genomes]
rs12335100	0.87[AFR][1000 genomes]
rs12335106	0.84[AFR][1000 genomes]
rs12335323	0.82[AFR][1000 genomes]
rs12707788	0.84[AFR][1000 genomes]
rs12707789	0.82[AFR][1000 genomes]
rs12707790	0.82[AFR][1000 genomes]
rs13249502	0.84[AFR][1000 genomes]
rs13249922	0.81[AFR][1000 genomes]
rs13257474	0.84[AFR][1000 genomes]
rs13257824	0.82[AFR][1000 genomes]
rs13259857	0.82[AFR][1000 genomes]
rs13260896	0.86[AFR][1000 genomes]
rs13261470	0.82[AFR][1000 genomes]
rs13262003	0.82[AFR][1000 genomes]
rs13262669	0.82[AFR][1000 genomes]
rs13263306	0.84[AFR][1000 genomes]
rs13268468	0.82[AFR][1000 genomes]
rs13272442	0.81[AFR][1000 genomes]
rs13276150	0.84[AFR][1000 genomes]
rs13276817	0.82[AFR][1000 genomes]
rs13277802	0.80[AFR][1000 genomes]
rs13279952	0.81[AFR][1000 genomes]
rs13280576	0.80[AFR][1000 genomes]
rs13439652	0.84[AFR][1000 genomes]
rs13439734	0.84[AFR][1000 genomes]
rs13439770	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1426296	0.82[AFR][1000 genomes]
rs1436596	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1436603	0.81[AFR][1000 genomes]
rs1521058	0.82[AFR][1000 genomes]
rs1593491	0.82[AFR][1000 genomes]
rs1593492	0.82[AFR][1000 genomes]
rs1593493	0.82[AFR][1000 genomes]
rs16870445	0.82[AFR][1000 genomes]
rs16870446	0.82[AFR][1000 genomes]
rs16870450	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16870502	0.92[AFR][1000 genomes]
rs16870614	0.84[AFR][1000 genomes]
rs16870616	0.84[AFR][1000 genomes]
rs17234389	0.84[AFR][1000 genomes]
rs2080608	0.82[AFR][1000 genomes]
rs2111491	0.84[AFR][1000 genomes]
rs2160713	0.84[AFR][1000 genomes]
rs28420723	0.84[AFR][1000 genomes]
rs28422794	0.80[AFR][1000 genomes]
rs28435392	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28470319	0.81[AFR][1000 genomes]
rs28480679	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28517319	0.82[AFR][1000 genomes]
rs28563855	0.81[AFR][1000 genomes]
rs28567610	0.82[AFR][1000 genomes]
rs28608939	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28751033	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28754823	0.81[AFR][1000 genomes]
rs28772965	0.80[AFR][1000 genomes]
rs28796041	0.86[AFR][1000 genomes]
rs28799635	0.92[AFR][1000 genomes]
rs28846684	0.82[AFR][1000 genomes]
rs28857239	0.82[AFR][1000 genomes]
rs28869329	0.81[AFR][1000 genomes]
rs34333071	0.92[AFR][1000 genomes]
rs34344264	0.82[AFR][1000 genomes]
rs34353892	0.84[AFR][1000 genomes]
rs34579655	0.81[AFR][1000 genomes]
rs34651893	0.82[AFR][1000 genomes]
rs34883289	0.82[AFR][1000 genomes]
rs34955447	0.84[AFR][1000 genomes]
rs34995326	0.82[AFR][1000 genomes]
rs35177572	0.82[AFR][1000 genomes]
rs35294891	0.84[AFR][1000 genomes]
rs35732252	0.84[AFR][1000 genomes]
rs4520130	0.93[AFR][1000 genomes]
rs4642610	0.82[AFR][1000 genomes]
rs4642611	0.82[AFR][1000 genomes]
rs55731986	0.82[AFR][1000 genomes]
rs56345763	0.84[AFR][1000 genomes]
rs56378194	0.88[AFR][1000 genomes]
rs56999386	0.84[AFR][1000 genomes]
rs57621488	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57915677	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58052023	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58594820	0.84[AFR][1000 genomes]
rs58850105	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs66767358	0.81[AFR][1000 genomes]
rs66873473	0.81[AFR][1000 genomes]
rs66956359	0.82[AFR][1000 genomes]
rs68145832	0.81[AFR][1000 genomes]
rs6985202	0.81[AFR][1000 genomes]
rs6985351	0.84[AFR][1000 genomes]
rs6985447	0.82[AFR][1000 genomes]
rs6986085	0.82[AFR][1000 genomes]
rs6986283	0.83[AFR][1000 genomes]
rs6986976	0.90[AFR][1000 genomes]
rs6991695	0.82[AFR][1000 genomes]
rs6992377	0.84[AFR][1000 genomes]
rs6993208	0.82[AFR][1000 genomes]
rs6993909	0.82[AFR][1000 genomes]
rs6995271	1.00[AMR][1000 genomes]
rs6995914	1.00[AMR][1000 genomes]
rs6996896	0.82[AFR][1000 genomes]
rs7000557	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7000677	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7001794	0.82[AFR][1000 genomes]
rs7002538	0.93[AFR][1000 genomes]
rs7002996	0.81[AFR][1000 genomes]
rs7012874	0.84[AFR][1000 genomes]
rs7014784	0.82[AFR][1000 genomes]
rs7014799	0.82[AFR][1000 genomes]
rs7014867	0.82[AFR][1000 genomes]
rs7015973	0.90[AFR][1000 genomes]
rs7016802	0.82[AFR][1000 genomes]
rs7016905	0.80[AFR][1000 genomes]
rs7018187	0.84[AFR][1000 genomes]
rs71512488	0.86[AFR][1000 genomes]
rs7341681	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7341682	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73696700	0.88[AFR][1000 genomes]
rs73697612	0.88[AFR][1000 genomes]
rs73700414	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73700420	0.81[AFR][1000 genomes]
rs73700421	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73701884	0.94[AFR][1000 genomes]
rs7813100	0.80[AFR][1000 genomes]
rs7818497	0.84[AFR][1000 genomes]
rs7824747	0.91[AFR][1000 genomes]
rs7825033	0.88[AFR][1000 genomes]
rs7825696	0.82[AFR][1000 genomes]
rs7825842	0.84[AFR][1000 genomes]
rs7827973	0.81[AFR][1000 genomes]
rs7830158	0.81[AFR][1000 genomes]
rs7833129	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7834353	0.82[AFR][1000 genomes]
rs7835266	0.84[AFR][1000 genomes]
rs7835792	0.82[AFR][1000 genomes]
rs7836022	0.81[AFR][1000 genomes]
rs7836148	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7838295	0.82[AFR][1000 genomes]
rs7840564	0.84[AFR][1000 genomes]
rs7842148	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7842972	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7843598	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7843709	0.82[AFR][1000 genomes]
rs7843860	0.81[AFR][1000 genomes]
rs7843928	0.82[AFR][1000 genomes]
rs7845290	0.81[AFR][1000 genomes]
rs7845384	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs9297332	1.00[AMR][1000 genomes]
rs9297333	0.84[AFR][1000 genomes]
rs9297334	0.81[AFR][1000 genomes]
rs9297335	0.81[AFR][1000 genomes]
rs9297336	0.82[AFR][1000 genomes]
rs9297338	0.84[AFR][1000 genomes]
rs9771560	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9987225	0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429931	chr8:104097396-104878014	Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
2	nsv1020476	chr8:104312212-104924482	Genic enhancers Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
3	nsv539704	chr8:104312212-104924482	Flanking Bivalent TSS/Enh Enhancers ZNF genes & repeats Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
4	nsv1023048	chr8:104355188-104872701	Flanking Active TSS Strong transcription Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
5	nsv539705	chr8:104355188-104872701	ZNF genes & repeats Enhancers Strong transcription Bivalent/Poised TSS Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
6	nsv1021345	chr8:104361854-104879684	Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
7	nsv1032085	chr8:104362187-104878345	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
8	nsv1034183	chr8:104369940-104814008	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
9	nsv539707	chr8:104369940-104814008	Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
10	esv2753239	chr8:104404824-104545824	Weak transcription Bivalent Enhancer Enhancers Strong transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
11	esv3384862	chr8:104511126-104513424	Bivalent Enhancer Bivalent/Poised TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:104510400-104511400	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
2	chr8:104510400-104514200	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
3	chr8:104510400-104514400	Active TSS	ES-I3 Cell Line	embryonic stem cell
4	chr8:104510400-104514600	Active TSS	HUES48 Cell Line	embryonic stem cell
5	chr8:104510400-104514800	Active TSS	H1 Cell Line	embryonic stem cell
6	chr8:104510400-104515000	Active TSS	HUES64 Cell Line	embryonic stem cell
7	chr8:104510600-104511400	Bivalent/Poised TSS	Fetal Intestine Large	intestine
8	chr8:104510600-104511400	Flanking Bivalent TSS/Enh	NH-A	brain
9	chr8:104510600-104511400	Bivalent/Poised TSS	NHDF-Ad	bronchial
10	chr8:104510600-104511600	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr8:104510600-104511600	Flanking Bivalent TSS/Enh	Duodenum Mucosa	Duodenum
12	chr8:104510600-104511800	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr8:104510600-104511800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr8:104510600-104512600	Active TSS	Brain Cingulate Gyrus	brain
15	chr8:104510600-104513200	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr8:104510600-104514200	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr8:104510600-104514200	Bivalent/Poised TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr8:104510600-104514200	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr8:104510600-104514200	Active TSS	Pancreatic Islets	Pancreatic Islet
20	chr8:104510600-104514400	Active TSS	H9 Cell Line	embryonic stem cell
21	chr8:104510600-104514400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
22	chr8:104510600-104514600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
23	chr8:104510600-104514600	Active TSS	iPS-18 Cell Line	embryonic stem cell
24	chr8:104510600-104514800	Active TSS	iPS-15b Cell Line	embryonic stem cell
25	chr8:104510800-104511400	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells short term culture	blood
26	chr8:104510800-104511400	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
27	chr8:104510800-104511400	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
28	chr8:104510800-104511400	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr8:104510800-104511400	Flanking Bivalent TSS/Enh	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr8:104510800-104511400	Bivalent Enhancer	Liver	Liver
31	chr8:104510800-104511400	Active TSS	Brain Angular Gyrus	brain
32	chr8:104510800-104511400	Active TSS	Esophagus	oesophagus
33	chr8:104510800-104511400	Bivalent Enhancer	Fetal Heart	heart
34	chr8:104510800-104511400	Bivalent/Poised TSS	Fetal Kidney	kidney
35	chr8:104510800-104511600	Bivalent/Poised TSS	Rectal Smooth Muscle	rectum
36	chr8:104510800-104511600	Bivalent Enhancer	Sigmoid Colon	Sigmoid Colon
37	chr8:104510800-104511800	Flanking Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr8:104510800-104511800	Flanking Bivalent TSS/Enh	H1 Derived Mesenchymal Stem Cells	ES cell derived
39	chr8:104510800-104511800	Flanking Bivalent TSS/Enh	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr8:104510800-104511800	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
41	chr8:104510800-104511800	Flanking Bivalent TSS/Enh	Foreskin Keratinocyte Primary Cells skin03	Skin
42	chr8:104510800-104511800	Flanking Bivalent TSS/Enh	Brain Hippocampus Middle	brain
43	chr8:104510800-104511800	Flanking Bivalent TSS/Enh	Colonic Mucosa	Colon
44	chr8:104510800-104511800	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
45	chr8:104510800-104511800	Flanking Bivalent TSS/Enh	Right Ventricle	heart
46	chr8:104510800-104511800	Bivalent Enhancer	Small Intestine	intestine
47	chr8:104510800-104511800	Flanking Active TSS	HMEC	breast
48	chr8:104510800-104511800	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
49	chr8:104510800-104512000	Active TSS	Breast Myoepithelial Primary Cells	Breast
50	chr8:104510800-104512000	Flanking Bivalent TSS/Enh	Primary T regulatory cells fromperipheralblood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links