Variant report

Variant	rs7014814
Chromosome Location	chr8:60188592-60188593
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10088994	0.87[AFR][1000 genomes]
rs10089184	0.89[AFR][1000 genomes]
rs10104395	0.89[AFR][1000 genomes]
rs4329263	0.89[AFR][1000 genomes]
rs59004396	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6982691	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7001107	0.89[AFR][1000 genomes]
rs7001175	0.89[AFR][1000 genomes]
rs7016373	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7017099	0.90[AFR][1000 genomes]
rs73254120	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73254128	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73254132	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9298008	0.89[AFR][1000 genomes]
rs9298009	0.89[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831328	chr8:60062971-60288276	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv1029441	chr8:60099776-60539141	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv539629	chr8:60099776-60539141	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv831329	chr8:60162977-60356031	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:60177600-60194800	Weak transcription	Fetal Brain Male	brain
2	chr8:60186800-60189000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr8:60187000-60189000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr8:60187800-60189800	Weak transcription	HMEC	breast
5	chr8:60188000-60189600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr8:60188000-60189800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr8:60188000-60190400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
8	chr8:60188000-60190400	Weak transcription	Osteobl	bone
9	chr8:60188200-60189600	Weak transcription	NHEK	skin
10	chr8:60188400-60188800	Weak transcription	Primary hematopoietic stem cells	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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