Variant report

Variant	rs7015603
Chromosome Location	chr8:60878571-60878572
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs16925628	1.00[AMR][1000 genomes]
rs16925640	1.00[AMR][1000 genomes]
rs16925644	1.00[AMR][1000 genomes]
rs16925658	1.00[AMR][1000 genomes]
rs16925707	1.00[AMR][1000 genomes]
rs16925710	1.00[AMR][1000 genomes]
rs16925717	1.00[AMR][1000 genomes]
rs73253357	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73255562	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73684936	1.00[AMR][1000 genomes]
rs7830982	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831331	chr8:60770382-60959633	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:60871600-60884800	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr8:60877400-60879600	Weak transcription	Primary B cells from peripheral blood	blood
3	chr8:60877600-60879000	Weak transcription	Primary B cells from cord blood	blood
4	chr8:60878000-60880000	Weak transcription	GM12878-XiMat	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links