Variant report

Variant	rs7020381
Chromosome Location	chr9:139553320-139553321
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3)
CpG islands
(count:61)
Chromatin interactive
region (count:3)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ZBTB7A	chr9:139553316-139553571	K562	blood:	n/a	chr9:139553443-139553454 chr9:139553444-139553455
2	GABPA	chr9:139552930-139553517	H1-hESC	embryonic stem cell:	n/a	n/a
3	ZBTB7A	chr9:139553150-139553592	ECC-1	luminal epithelium:	n/a	chr9:139553443-139553454 chr9:139553444-139553455

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:139553319-139553369	PrEC	prostate:	n/a
2	chr9:139553319-139553369	AoSMC	blood vessel:	n/a
3	chr9:139553319-139553369	GM19239	blood:	n/a
4	chr9:139553319-139553369	HCPEpiC	choroid plexus:	n/a
5	chr9:139553319-139553369	LNCaP	prostate:	n/a
6	chr9:139553319-139553369	AG04450	lung:	fetal
7	chr9:139553319-139553369	SAEC	small airway:	n/a
8	chr9:139553319-139553369	SK-N-SH	brain:	n/a
9	chr9:139553319-139553369	MCF-7	breast:	n/a
10	chr9:139553319-139553369	NH-A	brain:	n/a
11	chr9:139553319-139553369	CMK	blood:	n/a
12	chr9:139553319-139553369	HCM	heart:	n/a
13	chr9:139553319-139553369	ProgFib	skin:	n/a
14	chr9:139553319-139553369	GM12878	blood:	n/a
15	chr9:139553319-139553369	Hepatocyte	liver:	n/a
16	chr9:139553319-139553369	GM12892	blood:	n/a
17	chr9:139553319-139553369	ovcar-3	ovarian:	n/a
18	chr9:139553319-139553369	HepG2	liver:	n/a
19	chr9:139553319-139553369	HCT-116	colon:	n/a
20	chr9:139553319-139553369	MCF10A-Er-Src	breast:	n/a
21	chr9:139553319-139553369	BE2_C	brain:	n/a
22	chr9:139553319-139553369	HCF	heart:	n/a
23	chr9:139553319-139553369	HMEC	breast:	n/a
24	chr9:139553319-139553369	AG09319	gingival:	n/a
25	chr9:139553319-139553369	AG04449	skin:	fetal
26	chr9:139553319-139553369	Hela-S3	cervix:	n/a
27	chr9:139553319-139553369	GM12891	blood:	n/a
28	chr9:139553319-139553369	AG10803	skin:	n/a
29	chr9:139553319-139553369	NT2-D1	testis:	n/a
30	chr9:139553319-139553369	HNPCEpiC	eye:	n/a
31	chr9:139553319-139553369	HUVEC	blood vessel:	n/a
32	chr9:139553319-139553369	K562	blood:	n/a
33	chr9:139553319-139553369	NHDF-neo	bronchial:	n/a
34	chr9:139553319-139553369	H1-hESC	embryonic stem cell:	embryo
35	chr9:139553319-139553369	RPTEC	kidney:	n/a
36	chr9:139553319-139553369	PANC-1	pancreas:	n/a
37	chr9:139553319-139553369	A549	lung:	n/a
38	chr9:139553319-139553369	U87	brain:	n/a
39	chr9:139553319-139553369	IMR90	lung:	fetal
40	chr9:139553319-139553369	HEK293	kidney:	embryo
41	chr9:139553319-139553369	HL-60	blood:	n/a
42	chr9:139553319-139553369	NB4	blood:	n/a
43	chr9:139553319-139553369	HAEpiC	amniotic membrane:	n/a
44	chr9:139553319-139553369	HRE	kidney:	n/a
45	chr9:139553319-139553369	ECC-1	luminal epithelium:	n/a
46	chr9:139553319-139553369	SKMC	muscle:	n/a
47	chr9:139553319-139553369	T-47D	breast:	n/a
48	chr9:139553319-139553369	Jurkat	blood:	n/a
49	chr9:139553319-139553369	GM06990	blood:	n/a
50	chr9:139553319-139553369	HRCEpiC	kidney:	n/a

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:139376345..139381023-chr9:139550184..139554554,6	K562	blood:
2	chr9:139552484..139555423-chr9:139558985..139561771,2	MCF-7	breast:
3	chr9:139550367..139553990-chr9:139620470..139623821,3	MCF-7	breast:

No data

Variant related genes	Relation type
EGFL7	TF binding region
EGFL7	CpG island
ENSG00000172889	Chromatin interaction
ENSG00000233016	Chromatin interaction
ENSG00000196366	Chromatin interaction

Extended variants
information (count: 102 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs58230215	1.00[AMR][1000 genomes]
rs61643678	1.00[AMR][1000 genomes]
rs73668349	1.00[AMR][1000 genomes]
rs73668350	1.00[AMR][1000 genomes]
rs7846878	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7861306	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:96 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1849811	chr9:138939662-139755001	Bivalent Enhancer Strong transcription Weak transcription Genic enhancers Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	323 gene(s)	inside rSNPs	diseases
2	nsv894313	chr9:138965868-139583155	Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	233 gene(s)	inside rSNPs	diseases
3	nsv894314	chr9:138965868-139596420	Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	233 gene(s)	inside rSNPs	diseases
4	esv1822553	chr9:138967205-139755539	Genic enhancers Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	323 gene(s)	inside rSNPs	diseases
5	nsv430117	chr9:139049055-139608163	Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	205 gene(s)	inside rSNPs	diseases
6	nsv894326	chr9:139057463-139647074	Weak transcription Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	260 gene(s)	inside rSNPs	diseases
7	nsv894331	chr9:139061474-139590934	Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers Enhancers Strong transcription Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	204 gene(s)	inside rSNPs	diseases
8	nsv894337	chr9:139069713-139669111	Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	261 gene(s)	inside rSNPs	diseases
9	esv1851120	chr9:139101947-139711758	Bivalent Enhancer Weak transcription Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	275 gene(s)	inside rSNPs	diseases
10	nsv430118	chr9:139101947-139795504	Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	299 gene(s)	inside rSNPs	diseases
11	nsv894351	chr9:139124856-139679387	Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	262 gene(s)	inside rSNPs	diseases
12	nsv540342	chr9:139218422-139973312	Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	317 gene(s)	inside rSNPs	diseases
13	esv2758204	chr9:139252829-139826485	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	270 gene(s)	inside rSNPs	diseases
14	esv2759720	chr9:139252829-139826485	Weak transcription Enhancers Genic enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	270 gene(s)	inside rSNPs	diseases
15	nsv469918	chr9:139254317-140068342	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	341 gene(s)	inside rSNPs	diseases
16	esv1836722	chr9:139301583-139669111	Bivalent Enhancer Genic enhancers Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	212 gene(s)	inside rSNPs	diseases
17	nsv894371	chr9:139323201-139590934	Strong transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	142 gene(s)	inside rSNPs	diseases
18	nsv894374	chr9:139335599-139596420	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	140 gene(s)	inside rSNPs	diseases
19	esv1799492	chr9:139341612-139711758	Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	216 gene(s)	inside rSNPs	diseases
20	esv1807611	chr9:139344200-139633839	Enhancers Flanking Active TSS Genic enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	199 gene(s)	inside rSNPs	diseases
21	nsv540346	chr9:139360142-140164011	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	471 gene(s)	inside rSNPs	diseases
22	esv1803718	chr9:139368953-139643023	Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	199 gene(s)	inside rSNPs	diseases
23	esv1851291	chr9:139371234-139669111	Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	200 gene(s)	inside rSNPs	diseases
24	nsv894382	chr9:139376426-139590934	Flanking Active TSS Weak transcription Strong transcription Genic enhancers Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	140 gene(s)	inside rSNPs	diseases
25	esv1835929	chr9:139376426-139617836	Flanking Active TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	148 gene(s)	inside rSNPs	diseases
26	nsv894383	chr9:139376426-139620311	Enhancers Genic enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	156 gene(s)	inside rSNPs	diseases
27	nsv894384	chr9:139376426-139622024	Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	173 gene(s)	inside rSNPs	diseases
28	nsv894385	chr9:139376426-139647074	Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	199 gene(s)	inside rSNPs	diseases
29	nsv894386	chr9:139376426-139693992	Enhancers Weak transcription Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	208 gene(s)	inside rSNPs	diseases
30	nsv1039149	chr9:139376829-139991102	Active TSS Enhancers Strong transcription Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	303 gene(s)	inside rSNPs	diseases
31	esv1820573	chr9:139377938-139643023	Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Genic enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
32	esv1839109	chr9:139377938-139660589	Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Weak transcription Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	198 gene(s)	inside rSNPs	diseases
33	esv1796248	chr9:139380320-139590934	Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	117 gene(s)	inside rSNPs	diseases
34	esv1810467	chr9:139380320-139617985	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	127 gene(s)	inside rSNPs	diseases
35	esv1829857	chr9:139385438-139760041	Flanking Active TSS Enhancers Weak transcription Genic enhancers Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	212 gene(s)	inside rSNPs	diseases
36	esv1819204	chr9:139388365-139758238	Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	212 gene(s)	inside rSNPs	diseases
37	esv1803407	chr9:139393591-139643023	Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	176 gene(s)	inside rSNPs	diseases
38	esv1803979	chr9:139395473-139979276	Genic enhancers Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	267 gene(s)	inside rSNPs	diseases
39	esv1831778	chr9:139395473-139979276	Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	267 gene(s)	inside rSNPs	diseases
40	esv1821575	chr9:139395473-140068342	Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Enhancers Flanking Bivalent TSS/Enh Strong transcription Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	293 gene(s)	inside rSNPs	diseases
41	nsv8579	chr9:139399884-139654708	Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	176 gene(s)	inside rSNPs	diseases
42	nsv894392	chr9:139403102-139669111	Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	177 gene(s)	inside rSNPs	diseases
43	nsv894393	chr9:139403770-139575487	Enhancers Bivalent Enhancer Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
44	nsv894394	chr9:139403770-139620311	Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	133 gene(s)	inside rSNPs	diseases
45	nsv894397	chr9:139427066-139596420	Enhancers Bivalent/Poised TSS Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
46	nsv894402	chr9:139457506-139634495	Weak transcription Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	158 gene(s)	inside rSNPs	diseases
47	nsv466674	chr9:139477530-139564668	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
48	nsv615971	chr9:139477530-139564668	Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
49	esv2422220	chr9:139478587-140244550	Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	454 gene(s)	inside rSNPs	diseases
50	nsv894406	chr9:139483954-139575487	Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	77 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:49 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:139547600-139554400	Bivalent Enhancer	Fetal Muscle Trunk	muscle
2	chr9:139547800-139554400	Bivalent Enhancer	Placenta	Placenta
3	chr9:139549400-139556000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr9:139549600-139554200	Bivalent Enhancer	Primary B cells from peripheral blood	blood
5	chr9:139549600-139559000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
6	chr9:139549800-139554200	Bivalent Enhancer	Fetal Thymus	thymus
7	chr9:139549800-139558800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr9:139550000-139554200	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
9	chr9:139550000-139554600	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
10	chr9:139550000-139558000	Weak transcription	Gastric	stomach
11	chr9:139550400-139559600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
12	chr9:139550600-139554600	Bivalent/Poised TSS	Stomach Smooth Muscle	stomach
13	chr9:139550600-139559600	Active TSS	Right Atrium	heart
14	chr9:139551000-139554600	Bivalent Enhancer	Fetal Muscle Leg	muscle
15	chr9:139551000-139557000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr9:139551000-139558800	Active TSS	Left Ventricle	heart
17	chr9:139551200-139553600	Weak transcription	Fetal Lung	lung
18	chr9:139551200-139556800	Enhancers	HUVEC	blood vessel
19	chr9:139551800-139554600	Flanking Active TSS	Primary hematopoietic stem cells	blood
20	chr9:139552000-139554000	Bivalent Enhancer	Primary B cells from cord blood	blood
21	chr9:139552200-139554400	Bivalent Enhancer	Colonic Mucosa	Colon
22	chr9:139552200-139555600	Active TSS	Lung	lung
23	chr9:139552200-139559000	Active TSS	Right Ventricle	heart
24	chr9:139552400-139553400	Bivalent/Poised TSS	Adipose Nuclei	Adipose
25	chr9:139552400-139554200	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
26	chr9:139552400-139554600	Bivalent/Poised TSS	Skeletal Muscle Male	skeletal muscle
27	chr9:139552400-139556800	Enhancers	Spleen	Spleen
28	chr9:139552600-139553400	Flanking Bivalent TSS/Enh	Duodenum Mucosa	Duodenum
29	chr9:139552600-139554400	Bivalent Enhancer	Primary T regulatory cells fromperipheralblood	blood
30	chr9:139552600-139554400	Bivalent Enhancer	Primary T killer naive cells fromperipheralblood	blood
31	chr9:139552800-139553400	Enhancers	Liver	Liver
32	chr9:139552800-139553400	Bivalent Enhancer	Rectal Mucosa Donor 29	rectum
33	chr9:139552800-139553400	Bivalent Enhancer	HepG2	liver
34	chr9:139552800-139553600	Bivalent Enhancer	Fetal Intestine Small	intestine
35	chr9:139552800-139553600	Bivalent/Poised TSS	Skeletal Muscle Female	skeletal muscle
36	chr9:139552800-139554400	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
37	chr9:139552800-139554600	Bivalent Enhancer	Primary T helper naive cells fromperipheralblood	blood
38	chr9:139552800-139559200	Active TSS	Psoas Muscle	Psoas
39	chr9:139553000-139554000	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
40	chr9:139553000-139554000	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
41	chr9:139553000-139554200	Bivalent Enhancer	Primary T helper naive cells from peripheral blood	blood
42	chr9:139553000-139554200	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
43	chr9:139553000-139554200	Bivalent Enhancer	Primary T cells effector/memory enriched fromperipheralblood	blood
44	chr9:139553000-139555000	Weak transcription	K562	blood
45	chr9:139553200-139553400	Bivalent Enhancer	Sigmoid Colon	Sigmoid Colon
46	chr9:139553200-139553800	Bivalent/Poised TSS	Fetal Stomach	stomach
47	chr9:139553200-139554000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
48	chr9:139553200-139554200	Bivalent Enhancer	Primary T cells from cord blood	blood
49	chr9:139553200-139554200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--

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