Variant report

Variant	rs7043973
Chromosome Location	chr9:94679321-94679322
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:94668680..94671587-chr9:94678743..94680656,2	K562	blood:
2	chr9:94673439..94675902-chr9:94676796..94680111,3	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs61613997	1.00[AMR][1000 genomes]
rs7022802	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7863487	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047426	chr9:94363211-94758114	Weak transcription Bivalent Enhancer Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
2	nsv949008	chr9:94500776-95182133	Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
3	nsv530946	chr9:94633154-94715023	Bivalent/Poised TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:94668800-94682800	Weak transcription	Colonic Mucosa	Colon
2	chr9:94670200-94682800	Weak transcription	Fetal Kidney	kidney
3	chr9:94670400-94681200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr9:94670400-94682800	Weak transcription	Right Atrium	heart
5	chr9:94670600-94686200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr9:94671600-94682600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr9:94674600-94679400	Weak transcription	Duodenum Smooth Muscle	Duodenum
8	chr9:94674600-94679400	Weak transcription	Rectal Smooth Muscle	rectum
9	chr9:94676600-94679800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr9:94677000-94680000	Weak transcription	Spleen	Spleen
11	chr9:94677400-94683000	Weak transcription	K562	blood
12	chr9:94677600-94679600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr9:94677600-94682800	Weak transcription	Fetal Intestine Large	intestine
14	chr9:94678000-94685000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr9:94678200-94683600	Enhancers	Colon Smooth Muscle	Colon
16	chr9:94678200-94686600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr9:94678400-94679600	Enhancers	Fetal Heart	heart
18	chr9:94678400-94680200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
19	chr9:94678600-94679600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr9:94678600-94679800	Enhancers	Fetal Stomach	stomach
21	chr9:94678800-94679400	Weak transcription	Stomach Smooth Muscle	stomach
22	chr9:94678800-94686200	Weak transcription	Ovary	ovary
23	chr9:94679200-94679600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr9:94679200-94680800	Weak transcription	Fetal Lung	lung

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