Variant report

Variant	rs7047998
Chromosome Location	chr9:73223822-73223823
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:73222069..73224603-chr9:73228006..73230812,3	K562	blood:

rs_ID	r²[population]
rs17055371	0.88[JPT][hapmap]
rs3812533	0.91[ASN][1000 genomes]
rs3812534	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3812535	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7029762	0.91[EUR][1000 genomes]

Chromatin state (count:38 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73206600-73227800	Weak transcription	Aorta	Aorta
2	chr9:73213600-73224600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr9:73215800-73236800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr9:73216000-73227600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr9:73217000-73230200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr9:73217400-73231200	Weak transcription	Fetal Brain Female	brain
7	chr9:73217400-73233400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr9:73217400-73242400	Weak transcription	Pancreatic Islets	Pancreatic Islet
9	chr9:73217600-73224000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr9:73217600-73224400	Weak transcription	Brain Angular Gyrus	brain
11	chr9:73217600-73224600	Weak transcription	Brain Cingulate Gyrus	brain
12	chr9:73217600-73224600	Weak transcription	Ovary	ovary
13	chr9:73217600-73236400	Weak transcription	Fetal Kidney	kidney
14	chr9:73217800-73224200	Weak transcription	Fetal Heart	heart
15	chr9:73217800-73224400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr9:73217800-73224600	Weak transcription	Brain Substantia Nigra	brain
17	chr9:73217800-73228600	Weak transcription	Brain Anterior Caudate	brain
18	chr9:73218000-73224400	Weak transcription	Brain Hippocampus Middle	brain
19	chr9:73218000-73228400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
20	chr9:73218000-73229800	Weak transcription	Fetal Brain Male	brain
21	chr9:73218600-73224000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr9:73218600-73224000	Weak transcription	Osteobl	bone
23	chr9:73219800-73228000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
24	chr9:73220400-73227600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr9:73222000-73224400	Enhancers	Skeletal Muscle Female	skeletal muscle
26	chr9:73222000-73225600	Enhancers	Psoas Muscle	Psoas
27	chr9:73222200-73224400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
28	chr9:73222400-73225400	Enhancers	Skeletal Muscle Male	skeletal muscle
29	chr9:73222600-73226000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
30	chr9:73223200-73224000	Weak transcription	NHLF	lung
31	chr9:73223200-73224200	Weak transcription	Duodenum Smooth Muscle	Duodenum
32	chr9:73223200-73225000	Weak transcription	Small Intestine	intestine
33	chr9:73223400-73225200	Enhancers	Right Atrium	heart
34	chr9:73223400-73228400	Weak transcription	Left Ventricle	heart
35	chr9:73223600-73224600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
36	chr9:73223600-73225400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
37	chr9:73223600-73230000	Weak transcription	Rectal Mucosa Donor 31	rectum
38	chr9:73223800-73225400	Enhancers	NHDF-Ad	bronchial

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