Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11813874	0.93[EUR][1000 genomes]
rs11813875	0.93[EUR][1000 genomes]
rs16925331	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs16925357	0.93[EUR][1000 genomes]
rs1904039	0.93[EUR][1000 genomes]
rs28503173	1.00[EUR][1000 genomes]
rs34073058	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57518294	0.93[EUR][1000 genomes]
rs7085893	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72801443	0.93[EUR][1000 genomes]
rs73339256	0.93[EUR][1000 genomes]
rs73339259	0.93[EUR][1000 genomes]
rs74132860	1.00[EUR][1000 genomes]
rs74132869	1.00[EUR][1000 genomes]
rs74132871	1.00[EUR][1000 genomes]
rs74132873	0.93[EUR][1000 genomes]
rs74132874	0.93[EUR][1000 genomes]
rs74132876	0.93[EUR][1000 genomes]
rs74132877	0.93[EUR][1000 genomes]
rs74132878	0.93[EUR][1000 genomes]
rs74132880	0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045692	chr10:53301450-54086823	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:53713400-53742400	Weak transcription	Aorta	Aorta
2	chr10:53720400-53721600	Enhancers	Duodenum Mucosa	Duodenum
3	chr10:53720800-53729000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr10:53720800-53732600	Weak transcription	Psoas Muscle	Psoas
5	chr10:53720800-53732800	Weak transcription	Fetal Muscle Leg	muscle

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