| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv834047 |
chr2:52874257-53056239 |
ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv998380 |
chr2:52891706-53222155 |
Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Strong transcription Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv874132 |
chr2:52909087-53027798 |
Enhancers Weak transcription Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv874133 |
chr2:52910065-53023825 |
Enhancers Weak transcription Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv874134 |
chr2:52910065-53027798 |
Enhancers Weak transcription Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
esv2763631 |
chr2:52910862-53169629 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv874135 |
chr2:52937317-53061834 |
Enhancers ZNF genes & repeats Active TSS Weak transcription
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 8 |
nsv431058 |
chr2:52944395-53057924 |
Enhancers Weak transcription ZNF genes & repeats Active TSS
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 9 |
nsv997562 |
chr2:52949987-53007471 |
Enhancers Weak transcription Active TSS
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 10 |
esv2760626 |
chr2:52949987-53033546 |
Enhancers Weak transcription Active TSS ZNF genes & repeats
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 11 |
nsv527135 |
chr2:52957024-53019822 |
Enhancers Weak transcription Active TSS
|
lncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 12 |
nsv1006244 |
chr2:52958322-53169617 |
Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 13 |
nsv1005813 |
chr2:52959769-53114865 |
Weak transcription Enhancers Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 14 |
nsv1010978 |
chr2:52959769-53249951 |
Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 15 |
nsv1014068 |
chr2:52960353-53169617 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 16 |
nsv1013992 |
chr2:52992719-53033534 |
ZNF genes & repeats Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 17 |
nsv1011068 |
chr2:53000023-53033534 |
Enhancers ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 18 |
nsv1005759 |
chr2:53000765-53033534 |
Enhancers Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 19 |
nsv524510 |
chr2:53002225-53030336 |
Enhancers Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 20 |
nsv457807 |
chr2:53003740-53027798 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 21 |
nsv581975 |
chr2:53003740-53027798 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:21 , 50 per page) page:
1
