Variant report

Variant	rs7100478
Chromosome Location	chr10:61797018-61797019
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:61796631..61798492-chr10:61798651..61800194,2	K562	blood:

rs_ID	r²[population]
rs1002442	0.85[CHB][hapmap];1.00[JPT][hapmap]
rs10509117	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs10509118	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs10994160	0.85[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs16914643	1.00[CHB][hapmap]
rs2393578	0.86[JPT][hapmap];1.00[ASN][1000 genomes]
rs2393579	0.85[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]

Chromatin state (count:40 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61783600-61801200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
2	chr10:61786400-61815000	Weak transcription	Left Ventricle	heart
3	chr10:61788800-61803600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr10:61789000-61798000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr10:61789000-61819200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr10:61789200-61802800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr10:61789400-61807600	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr10:61789600-61802800	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr10:61789600-61827800	Weak transcription	Fetal Brain Female	brain
10	chr10:61790000-61803400	Weak transcription	Fetal Brain Male	brain
11	chr10:61790200-61835000	Weak transcription	Primary T cells from cord blood	blood
12	chr10:61790400-61799600	Weak transcription	Stomach Mucosa	stomach
13	chr10:61791200-61803800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr10:61791200-61814200	Weak transcription	Primary T helper cells PMA-I stimulated	--
15	chr10:61791600-61828600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
16	chr10:61791800-61803400	Weak transcription	Stomach Smooth Muscle	stomach
17	chr10:61791800-61815400	Weak transcription	Fetal Intestine Large	intestine
18	chr10:61791800-61829400	Weak transcription	Fetal Intestine Small	intestine
19	chr10:61791800-61849000	Weak transcription	Pancreas	Pancrea
20	chr10:61792000-61801200	Weak transcription	Brain Cingulate Gyrus	brain
21	chr10:61792000-61803000	Weak transcription	Duodenum Smooth Muscle	Duodenum
22	chr10:61792200-61883200	Weak transcription	Psoas Muscle	Psoas
23	chr10:61792600-61802800	Weak transcription	Brain Angular Gyrus	brain
24	chr10:61792600-61815000	Weak transcription	Skeletal Muscle Male	skeletal muscle
25	chr10:61792800-61802400	Weak transcription	Liver	Liver
26	chr10:61792800-61802800	Weak transcription	Brain Substantia Nigra	brain
27	chr10:61793000-61799000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
28	chr10:61793000-61799600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr10:61793000-61802400	Weak transcription	Brain Hippocampus Middle	brain
30	chr10:61793200-61819000	Weak transcription	Primary T cells fromperipheralblood	blood
31	chr10:61793400-61800200	Weak transcription	Fetal Heart	heart
32	chr10:61794400-61803400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
33	chr10:61794600-61800600	Weak transcription	Rectal Mucosa Donor 29	rectum
34	chr10:61795600-61804000	Strong transcription	Placenta	Placenta
35	chr10:61795800-61802400	Weak transcription	Primary T helper cells fromperipheralblood	blood
36	chr10:61796000-61834800	Weak transcription	H9 Cell Line	embryonic stem cell
37	chr10:61796400-61801600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
38	chr10:61796600-61799000	Weak transcription	Placenta Amnion	Placenta Amnion
39	chr10:61796800-61799600	Strong transcription	Skeletal Muscle Female	skeletal muscle
40	chr10:61797000-61803200	Weak transcription	HSMMtube	muscle

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