Variant report

Variant	rs7107584
Chromosome Location	chr11:63598690-63598691
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:63534833..63536648-chr11:63595467..63599142,3	MCF-7	breast:
2	chr11:63595860..63598960-chr11:63603079..63605132,3	MCF-7	breast:
3	chr11:63592382..63594241-chr11:63598180..63600535,2	K562	blood:
4	chr11:63598165..63599939-chr11:63604514..63606107,2	MCF-7	breast:
5	chr11:63597538..63602989-chr11:63603448..63608044,6	K562	blood:
6	chr11:63583415..63585834-chr11:63596910..63599617,2	K562	blood:

Variant related genes	Relation type
ENSG00000072518	Chromatin interaction
ENSG00000255651	Chromatin interaction

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs10897471	1.00[MEX][hapmap]
rs11231649	0.87[TSI][hapmap]
rs11231657	0.87[TSI][hapmap]
rs12283313	1.00[MEX][hapmap];0.87[TSI][hapmap]
rs320113	1.00[MEX][hapmap]
rs744864	1.00[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051171	chr11:62987064-63835715	Genic enhancers Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
2	nsv468589	chr11:63515752-63713239	Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
3	nsv555180	chr11:63515752-63713239	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:63582200-63604600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr11:63582400-63604800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
3	chr11:63582600-63604800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
4	chr11:63582600-63604800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr11:63583600-63604600	Weak transcription	Fetal Brain Male	brain
6	chr11:63584200-63604600	Weak transcription	Fetal Heart	heart
7	chr11:63584200-63604800	Weak transcription	Primary neutrophils fromperipheralblood	blood
8	chr11:63588800-63604800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
9	chr11:63589200-63605000	Weak transcription	Pancreatic Islets	Pancreatic Islet
10	chr11:63590600-63604600	Weak transcription	K562	blood
11	chr11:63590800-63605200	Weak transcription	Small Intestine	intestine
12	chr11:63591000-63604600	Weak transcription	HMEC	breast
13	chr11:63591000-63604800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
14	chr11:63592000-63604600	Weak transcription	Rectal Mucosa Donor 31	rectum
15	chr11:63592400-63600000	Weak transcription	Primary B cells from cord blood	blood
16	chr11:63592400-63604600	Weak transcription	Fetal Kidney	kidney
17	chr11:63592600-63599800	Weak transcription	Primary T cells fromperipheralblood	blood
18	chr11:63592600-63600600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr11:63592600-63602200	Weak transcription	Colonic Mucosa	Colon
20	chr11:63592600-63604800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
21	chr11:63592600-63604800	Weak transcription	Primary T helper cells PMA-I stimulated	--
22	chr11:63592800-63599800	Weak transcription	Primary B cells from peripheral blood	blood
23	chr11:63592800-63604400	Weak transcription	Hela-S3	cervix
24	chr11:63592800-63604600	Weak transcription	Pancreas	Pancrea
25	chr11:63592800-63604800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
26	chr11:63592800-63605000	Weak transcription	Liver	Liver
27	chr11:63593000-63604600	Weak transcription	Skeletal Muscle Female	skeletal muscle
28	chr11:63593000-63604600	Weak transcription	NHEK	skin
29	chr11:63593000-63605200	Weak transcription	NHDF-Ad	bronchial
30	chr11:63593000-63606400	Weak transcription	Aorta	Aorta
31	chr11:63593200-63604800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
32	chr11:63594000-63599800	Weak transcription	GM12878-XiMat	blood
33	chr11:63594000-63604600	Weak transcription	Stomach Mucosa	stomach
34	chr11:63594000-63605600	Weak transcription	HSMMtube	muscle
35	chr11:63594200-63599800	Weak transcription	Primary monocytes fromperipheralblood	blood
36	chr11:63594200-63605000	Weak transcription	Fetal Lung	lung
37	chr11:63594200-63605200	Weak transcription	NH-A	brain
38	chr11:63594200-63605600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr11:63594400-63604800	Weak transcription	Primary T cells from cord blood	blood
40	chr11:63594400-63604800	Weak transcription	Rectal Smooth Muscle	rectum
41	chr11:63594400-63604800	Weak transcription	HUVEC	blood vessel
42	chr11:63594400-63605000	Weak transcription	Brain Angular Gyrus	brain
43	chr11:63594400-63605400	Weak transcription	HSMM	muscle
44	chr11:63594400-63605400	Weak transcription	Osteobl	bone
45	chr11:63594600-63599800	Weak transcription	Primary hematopoietic stem cells	blood
46	chr11:63594600-63599800	Weak transcription	Primary T helper cells fromperipheralblood	blood
47	chr11:63594600-63602200	Weak transcription	HepG2	liver
48	chr11:63594600-63604400	Weak transcription	Duodenum Mucosa	Duodenum
49	chr11:63594600-63604600	Weak transcription	Brain Substantia Nigra	brain
50	chr11:63594600-63605000	Weak transcription	Muscle Satellite Cultured Cells	--

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