Variant report

Variant	rs7109616
Chromosome Location	chr11:59574345-59574346
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:11)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:59521670..59524487-chr11:59574075..59576377,3	K562	blood:
2	chr11:59553190..59555001-chr11:59572603..59574846,2	MCF-7	breast:
3	chr11:59573396..59576382-chr11:59576556..59578137,2	MCF-7	breast:
4	chr11:59484450..59486779-chr11:59573613..59575249,2	K562	blood:
5	chr11:59536179..59538749-chr11:59573920..59575586,2	K562	blood:
6	chr11:59559259..59561264-chr11:59573510..59575992,2	K562	blood:
7	chr11:59567507..59571426-chr11:59571607..59574837,4	MCF-7	breast:
8	chr11:59520875..59523916-chr11:59572578..59576377,3	K562	blood:
9	chr11:59521237..59523765-chr11:59571453..59574351,3	MCF-7	breast:
10	chr11:59572980..59575934-chr11:59668133..59670505,2	K562	blood:
11	chr11:59573215..59575325-chr11:60279867..60282079,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000166900	Chromatin interaction
ENSG00000254477	Chromatin interaction
ENSG00000166902	Chromatin interaction

rs_ID	r²[population]
rs7109274	1.00[AFR][1000 genomes]

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:59551600-59576600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
2	chr11:59551600-59577200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr11:59554800-59576400	Strong transcription	Primary monocytes fromperipheralblood	blood
4	chr11:59554800-59576400	Strong transcription	Monocytes-CD14+_RO01746	blood
5	chr11:59555000-59576800	Strong transcription	Primary neutrophils fromperipheralblood	blood
6	chr11:59555600-59576600	Strong transcription	Placenta	Placenta
7	chr11:59556000-59577000	Weak transcription	Fetal Heart	heart
8	chr11:59567000-59576400	Strong transcription	Primary B cells from cord blood	blood
9	chr11:59567200-59576600	Strong transcription	iPS-20b Cell Line	embryonic stem cell
10	chr11:59567800-59574800	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr11:59568800-59577000	Weak transcription	Fetal Brain Male	brain
12	chr11:59569800-59576000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr11:59570000-59574800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
14	chr11:59570000-59576400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr11:59570000-59576600	Strong transcription	H1 Cell Line	embryonic stem cell
16	chr11:59570000-59576800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
17	chr11:59570000-59577000	Weak transcription	Stomach Mucosa	stomach
18	chr11:59570000-59577200	Weak transcription	Pancreatic Islets	Pancreatic Islet
19	chr11:59570000-59577400	Weak transcription	Right Atrium	heart
20	chr11:59570200-59574600	Strong transcription	NHEK	skin
21	chr11:59570200-59574800	Strong transcription	Fetal Intestine Large	intestine
22	chr11:59570200-59576400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr11:59570400-59574400	Strong transcription	Rectal Mucosa Donor 31	rectum
24	chr11:59570400-59574600	Strong transcription	Fetal Intestine Small	intestine
25	chr11:59570400-59574800	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr11:59570400-59575800	Strong transcription	Muscle Satellite Cultured Cells	--
27	chr11:59570400-59575800	Strong transcription	Left Ventricle	heart
28	chr11:59570400-59576200	Strong transcription	Primary B cells from peripheral blood	blood
29	chr11:59570400-59576400	Strong transcription	Primary T cells from cord blood	blood
30	chr11:59570400-59576400	Strong transcription	Duodenum Mucosa	Duodenum
31	chr11:59570400-59576600	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
32	chr11:59570400-59576800	Strong transcription	HUES6 Cell Line	embryonic stem cell
33	chr11:59570400-59576800	Strong transcription	HUES64 Cell Line	embryonic stem cell
34	chr11:59570400-59577000	Strong transcription	Rectal Mucosa Donor 29	rectum
35	chr11:59570600-59574600	Strong transcription	Liver	Liver
36	chr11:59570600-59574800	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
37	chr11:59570600-59575400	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr11:59570600-59575600	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
39	chr11:59570600-59576200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
40	chr11:59570600-59576200	Strong transcription	Adipose Nuclei	Adipose
41	chr11:59570600-59576400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
42	chr11:59570600-59576400	Strong transcription	HUVEC	blood vessel
43	chr11:59570600-59576600	Strong transcription	HUES48 Cell Line	embryonic stem cell
44	chr11:59570600-59576600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr11:59570600-59577200	Weak transcription	Fetal Kidney	kidney
46	chr11:59570800-59574800	Strong transcription	Spleen	Spleen
47	chr11:59570800-59575400	Strong transcription	Brain Hippocampus Middle	brain
48	chr11:59570800-59575600	Strong transcription	Sigmoid Colon	Sigmoid Colon
49	chr11:59570800-59576400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
50	chr11:59570800-59577000	Strong transcription	Skeletal Muscle Female	skeletal muscle

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