Variant report

Variant	rs7112554
Chromosome Location	chr11:10448580-10448581
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs11826408	1.00[MEX][hapmap]
rs12280618	1.00[AMR][1000 genomes]
rs12285886	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7116321	0.89[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430319	chr11:10027543-10711224	Enhancers Weak transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	75 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:10447600-10448600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr11:10447600-10448600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr11:10447800-10448600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr11:10447800-10448600	Enhancers	Muscle Satellite Cultured Cells	--
5	chr11:10447800-10448600	Enhancers	NHDF-Ad	bronchial
6	chr11:10448000-10448600	Enhancers	Osteobl	bone
7	chr11:10448000-10449400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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