Variant report

Variant	rs71126370
Chromosome Location	chr7:100762165-100762166
allele	-/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:100751112..100754051-chr7:100759784..100762309,3	MCF-7	breast:
2	chr7:100754972..100758673-chr7:100760651..100765191,4	K562	blood:
3	chr7:100761869..100763568-chr7:100766279..100768842,3	K562	blood:
4	chr7:100755889..100757654-chr7:100761288..100763415,3	K562	blood:
5	chr7:100748557..100751885-chr7:100761807..100763776,3	MCF-7	breast:
6	chr7:100733241..100735630-chr7:100761919..100764639,2	K562	blood:
7	chr7:100752460..100757093-chr7:100759104..100763544,6	MCF-7	breast:
8	chr7:100751228..100753347-chr7:100760665..100763411,4	K562	blood:
9	chr7:100758907..100762284-chr7:100803810..100808280,4	MCF-7	breast:

No data

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs34586046	0.89[ASN][1000 genomes]
rs6465787	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031942	chr7:100606734-100788660	Strong transcription Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
2	esv1833777	chr7:100632790-100800131	Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
3	nsv1033081	chr7:100669629-100771824	Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
4	nsv831075	chr7:100692297-100917018	Bivalent/Poised TSS Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
5	nsv933653	chr7:100701931-101515782	Active TSS ZNF genes & repeats Bivalent Enhancer Enhancers Genic enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
6	nsv1030604	chr7:100717732-101223465	Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	76 gene(s)	inside rSNPs	diseases
7	nsv464649	chr7:100739682-100810983	Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Enhancers Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
8	nsv607972	chr7:100739682-100810983	Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
9	esv2422376	chr7:100743485-101016471	Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
10	nsv1018841	chr7:100760410-100868299	Flanking Active TSS Strong transcription Weak transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	44 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:55 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:100752400-100764600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr7:100752600-100765400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr7:100755000-100764800	Weak transcription	Psoas Muscle	Psoas
4	chr7:100755600-100763200	Weak transcription	Lung	lung
5	chr7:100756000-100763200	Weak transcription	Spleen	Spleen
6	chr7:100757000-100765400	Enhancers	HUVEC	blood vessel
7	chr7:100757600-100770400	Enhancers	Placenta	Placenta
8	chr7:100759600-100765400	Enhancers	NHDF-Ad	bronchial
9	chr7:100759800-100764000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr7:100759800-100765400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr7:100759800-100765400	Enhancers	Osteobl	bone
12	chr7:100760200-100762200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr7:100760200-100762600	Enhancers	Hela-S3	cervix
14	chr7:100760200-100763400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr7:100760200-100763800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr7:100760200-100765400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr7:100760200-100765400	Enhancers	NH-A	brain
18	chr7:100760400-100762400	Enhancers	Right Ventricle	heart
19	chr7:100760400-100763000	Enhancers	NHEK	skin
20	chr7:100760400-100763600	Enhancers	Fetal Stomach	stomach
21	chr7:100760400-100763600	Enhancers	Stomach Smooth Muscle	stomach
22	chr7:100760400-100765200	Enhancers	Ovary	ovary
23	chr7:100760400-100765400	Enhancers	Fetal Muscle Leg	muscle
24	chr7:100760400-100765400	Enhancers	NHLF	lung
25	chr7:100760800-100762200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
26	chr7:100760800-100763000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
27	chr7:100760800-100763000	Weak transcription	HSMM	muscle
28	chr7:100760800-100765200	Enhancers	A549	lung
29	chr7:100760800-100765400	Enhancers	Muscle Satellite Cultured Cells	--
30	chr7:100761000-100762400	Enhancers	Fetal Muscle Trunk	muscle
31	chr7:100761000-100762400	Enhancers	HepG2	liver
32	chr7:100761000-100763000	Weak transcription	H1 Cell Line	embryonic stem cell
33	chr7:100761000-100763000	Weak transcription	HUES6 Cell Line	embryonic stem cell
34	chr7:100761000-100763000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
35	chr7:100761000-100763200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
36	chr7:100761000-100763200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
37	chr7:100761000-100764600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr7:100761000-100764600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
39	chr7:100761000-100764800	Weak transcription	Stomach Mucosa	stomach
40	chr7:100761000-100765200	Weak transcription	K562	blood
41	chr7:100761200-100763000	Weak transcription	Cortex derived primary cultured neurospheres	brain
42	chr7:100761200-100763000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
43	chr7:100761200-100764600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
44	chr7:100761400-100765400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr7:100761800-100762400	Enhancers	Left Ventricle	heart
46	chr7:100761800-100763000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
47	chr7:100761800-100763000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
48	chr7:100761800-100763400	Weak transcription	Fetal Heart	heart
49	chr7:100761800-100765400	Weak transcription	Fetal Lung	lung
50	chr7:100761800-100770400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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