Variant report

Variant	rs7113991
Chromosome Location	chr11:73708930-73708931
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr11:73708780-73708930	GM12864	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:73699151..73702599-chr11:73708799..73712495,4	K562	blood:
2	chr11:73691320..73695538-chr11:73704392..73710067,8	MCF-7	breast:

Variant related genes	Relation type
ENSG00000256723	TF binding region
ENSG00000175567	Chromatin interaction

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs2129672	1.00[EUR][1000 genomes]
rs34448930	1.00[AMR][1000 genomes]
rs35477575	1.00[EUR][1000 genomes]
rs45462496	1.00[EUR][1000 genomes]
rs45486892	1.00[EUR][1000 genomes]
rs45569936	1.00[AMR][1000 genomes]
rs60412377	1.00[EUR][1000 genomes]
rs7119052	1.00[AMR][1000 genomes]
rs7120370	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs7933802	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs7946879	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv492091	chr11:73285970-73844424	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	85 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:54 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:73695200-73711000	Weak transcription	Fetal Intestine Small	intestine
2	chr11:73702000-73711800	Enhancers	Primary B cells from peripheral blood	blood
3	chr11:73702600-73711800	Weak transcription	Spleen	Spleen
4	chr11:73702800-73711400	Weak transcription	Fetal Muscle Trunk	muscle
5	chr11:73703000-73710000	Weak transcription	Fetal Muscle Leg	muscle
6	chr11:73703000-73719400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr11:73704000-73709000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
8	chr11:73706000-73713800	Weak transcription	Duodenum Mucosa	Duodenum
9	chr11:73706400-73711800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr11:73706800-73712000	Weak transcription	Fetal Lung	lung
11	chr11:73706800-73713600	Weak transcription	Liver	Liver
12	chr11:73706800-73713800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr11:73707000-73711200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
14	chr11:73707000-73714400	Weak transcription	Primary neutrophils fromperipheralblood	blood
15	chr11:73707200-73709200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
16	chr11:73707200-73709600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
17	chr11:73707200-73711000	Weak transcription	Fetal Brain Female	brain
18	chr11:73707200-73713600	Weak transcription	Monocytes-CD14+_RO01746	blood
19	chr11:73707200-73714800	Weak transcription	Primary hematopoietic stem cells	blood
20	chr11:73707400-73709400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
21	chr11:73707400-73709400	Enhancers	Primary T killer memory cells from peripheral blood	blood
22	chr11:73707400-73711400	Enhancers	Primary T cells from cord blood	blood
23	chr11:73707400-73711400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr11:73707400-73711600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr11:73707400-73711800	Enhancers	Primary B cells from cord blood	blood
26	chr11:73707400-73711800	Enhancers	Primary T helper cells PMA-I stimulated	--
27	chr11:73707400-73713200	Weak transcription	Primary monocytes fromperipheralblood	blood
28	chr11:73707400-73719800	Weak transcription	Dnd41	blood
29	chr11:73707600-73709800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
30	chr11:73707600-73710000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
31	chr11:73707600-73711600	Enhancers	Primary T cells fromperipheralblood	blood
32	chr11:73707600-73711600	Weak transcription	Thymus	Thymus
33	chr11:73707600-73711800	Enhancers	Primary T helper cells fromperipheralblood	blood
34	chr11:73708000-73717600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
35	chr11:73708200-73709200	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
36	chr11:73708200-73710200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
37	chr11:73708200-73710800	Weak transcription	H1 Cell Line	embryonic stem cell
38	chr11:73708200-73711400	Weak transcription	Right Ventricle	heart
39	chr11:73708200-73713600	Weak transcription	Rectal Mucosa Donor 29	rectum
40	chr11:73708600-73709400	Enhancers	K562	blood
41	chr11:73708600-73710800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
42	chr11:73708600-73711800	Weak transcription	Lung	lung
43	chr11:73708600-73712200	Weak transcription	Rectal Mucosa Donor 31	rectum
44	chr11:73708600-73714800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
45	chr11:73708800-73709000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
46	chr11:73708800-73710000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
47	chr11:73708800-73710600	Weak transcription	Fetal Thymus	thymus
48	chr11:73708800-73711000	Weak transcription	Fetal Stomach	stomach
49	chr11:73708800-73711200	Enhancers	GM12878-XiMat	blood
50	chr11:73708800-73711800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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