Variant report

Variant	rs7114753
Chromosome Location	chr11:106860044-106860045
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs11211957	1.00[AMR][1000 genomes]
rs11211981	1.00[AMR][1000 genomes]
rs12279909	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12282090	1.00[AMR][1000 genomes]
rs12285116	1.00[AMR][1000 genomes]
rs12287751	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12292574	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1346030	1.00[AMR][1000 genomes]
rs7112914	1.00[AMR][1000 genomes]
rs7131642	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531938	chr11:106760733-107156814	Enhancers Bivalent/Poised TSS Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106855000-106861000	Weak transcription	Fetal Brain Male	brain
2	chr11:106855000-106868400	Weak transcription	Brain Angular Gyrus	brain
3	chr11:106856400-106861400	Enhancers	NHDF-Ad	bronchial
4	chr11:106857600-106861600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr11:106857800-106861400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
6	chr11:106858200-106860800	Weak transcription	Skeletal Muscle Male	skeletal muscle
7	chr11:106858200-106861000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr11:106858200-106861000	Weak transcription	Placenta	Placenta
9	chr11:106858200-106861600	Enhancers	Fetal Heart	heart
10	chr11:106858400-106861000	Weak transcription	Fetal Muscle Trunk	muscle
11	chr11:106859000-106860800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
12	chr11:106859600-106861000	Enhancers	Fetal Lung	lung
13	chr11:106859800-106860200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr11:106859800-106860600	Weak transcription	Fetal Kidney	kidney
15	chr11:106859800-106860800	Weak transcription	Esophagus	oesophagus
16	chr11:106859800-106860800	Weak transcription	Fetal Muscle Leg	muscle
17	chr11:106859800-106860800	Weak transcription	NHLF	lung
18	chr11:106859800-106861000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr11:106859800-106861000	Weak transcription	Pancreas	Pancrea
20	chr11:106860000-106861000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr11:106860000-106861000	Weak transcription	Ovary	ovary
22	chr11:106860000-106861000	Weak transcription	Right Atrium	heart
23	chr11:106860000-106861000	Weak transcription	HSMMtube	muscle
24	chr11:106860000-106861200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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