Variant report

Variant	rs7118731
Chromosome Location	chr11:102689801-102689802
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs1010698	0.87[ASN][1000 genomes]
rs10791596	0.83[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs10895364	0.81[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs10895365	0.86[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs11225434	0.86[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs1144396	0.95[ASN][1000 genomes]
rs1144397	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1144398	0.97[AFR][1000 genomes]
rs12801529	0.84[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs12804136	0.86[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2097248	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs2155013	0.87[ASN][1000 genomes]
rs2212637	0.82[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs4754884	0.87[ASN][1000 genomes]
rs520540	0.86[ASN][1000 genomes]
rs565082	0.80[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs575027	0.87[ASN][1000 genomes]
rs591058	0.85[ASN][1000 genomes]
rs595840	0.87[ASN][1000 genomes]
rs602128	0.84[ASN][1000 genomes]
rs617819	0.84[ASN][1000 genomes]
rs632478	0.84[ASN][1000 genomes]
rs633962	0.86[ASN][1000 genomes]
rs635746	0.87[ASN][1000 genomes]
rs639752	0.86[ASN][1000 genomes]
rs645419	0.84[ASN][1000 genomes]
rs6590993	0.86[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs6590994	0.86[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs666734	0.87[ASN][1000 genomes]
rs678815	0.84[ASN][1000 genomes]
rs679620	0.84[ASN][1000 genomes]
rs7117013	0.84[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs7126392	0.83[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs756544	0.85[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs7926920	0.83[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs7946057	0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898335	chr11:102682285-102866158	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:102678800-102690000	Weak transcription	Gastric	stomach
2	chr11:102679000-102690400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr11:102684400-102695200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr11:102687800-102692200	Weak transcription	Right Atrium	heart

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