The 2.0 version of rSNPBase

Variant report

Variant rs7122569
Chromosome Location chr11:34089010-34089011
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:34075400-34094200 Weak transcription Placenta Amnion Placenta Amnion
2 chr11:34075400-34094400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr11:34075400-34103800 Weak transcription Aorta Aorta
4 chr11:34075600-34093600 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr11:34075600-34100200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr11:34075800-34093600 Weak transcription HSMMtube muscle
7 chr11:34076200-34089400 Weak transcription H9 Cell Line embryonic stem cell
8 chr11:34077000-34100600 Weak transcription Esophagus oesophagus
9 chr11:34077400-34089200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr11:34077400-34090200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr11:34077400-34094800 Weak transcription Colonic Mucosa Colon
12 chr11:34078200-34092000 Weak transcription Stomach Mucosa stomach
13 chr11:34078800-34089400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr11:34079000-34089200 Weak transcription Stomach Smooth Muscle stomach
15 chr11:34079000-34089400 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr11:34079000-34092600 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr11:34079000-34094000 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr11:34079000-34095000 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr11:34079000-34126600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr11:34079600-34089600 Weak transcription Fetal Brain Male brain
21 chr11:34079800-34089200 Weak transcription Brain Hippocampus Middle brain
22 chr11:34080800-34089400 Weak transcription Brain Angular Gyrus brain
23 chr11:34081200-34089400 Weak transcription Brain Cingulate Gyrus brain
24 chr11:34081400-34089600 Weak transcription Brain Inferior Temporal Lobe brain
25 chr11:34081400-34090000 Strong transcription Dnd41 blood
26 chr11:34083400-34089200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr11:34083400-34089400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr11:34083400-34126600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr11:34083600-34091800 Weak transcription Fetal Stomach stomach
30 chr11:34083600-34095000 Weak transcription Lung lung
31 chr11:34083600-34124800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr11:34083800-34089600 Weak transcription Fetal Muscle Leg muscle
33 chr11:34085200-34089200 Weak transcription Colon Smooth Muscle Colon
34 chr11:34085200-34089200 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr11:34085200-34089400 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr11:34085200-34089400 Weak transcription NHLF lung
37 chr11:34085200-34089800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr11:34085200-34090000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr11:34085200-34090200 Enhancers Primary T helper naive cells fromperipheralblood blood
40 chr11:34085200-34090200 Enhancers Primary T killer naive cells fromperipheralblood blood
41 chr11:34085200-34093200 Weak transcription H1 Cell Line embryonic stem cell
42 chr11:34085200-34093200 Weak transcription Thymus Thymus
43 chr11:34085200-34093200 Weak transcription HMEC breast
44 chr11:34085200-34093600 Weak transcription Rectal Smooth Muscle rectum
45 chr11:34085400-34089200 Weak transcription Pancreas Pancrea
46 chr11:34085400-34094800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr11:34085600-34089400 Weak transcription Primary hematopoietic stem cells blood
48 chr11:34085600-34089400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr11:34085600-34092000 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr11:34086000-34089200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015