Variant report

Variant	rs7126070
Chromosome Location	chr11:72640071-72640072
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:72637998..72640922-chr11:72851537..72853947,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000137478	Chromatin interaction

Extended variants
information (count: 9 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10793048	0.83[EUR][1000 genomes]
rs10898889	0.92[EUR][1000 genomes]
rs11822039	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12799445	0.91[EUR][1000 genomes]
rs12805658	0.81[EUR][1000 genomes]
rs4944016	0.85[EUR][1000 genomes]
rs6592500	0.86[ASN][1000 genomes]
rs7946861	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3394774	chr11:72320884-72694077	Genic enhancers Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	73 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs7126070	STARD10	cis	Whole Blood	GTEx

Chromatin state (count:63 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:72577200-72651600	Weak transcription	Gastric	stomach
2	chr11:72600800-72653200	Weak transcription	Lung	lung
3	chr11:72601000-72641200	Weak transcription	HSMMtube	muscle
4	chr11:72607000-72643000	Weak transcription	HSMM	muscle
5	chr11:72612400-72649000	Weak transcription	Aorta	Aorta
6	chr11:72614200-72640400	Weak transcription	Rectal Mucosa Donor 29	rectum
7	chr11:72619600-72641400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr11:72621000-72651000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr11:72623600-72643400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr11:72624200-72654400	Weak transcription	Duodenum Mucosa	Duodenum
11	chr11:72624400-72652000	Weak transcription	Fetal Muscle Trunk	muscle
12	chr11:72625600-72646000	Weak transcription	Fetal Lung	lung
13	chr11:72625800-72640400	Weak transcription	Fetal Stomach	stomach
14	chr11:72627200-72640800	Weak transcription	Fetal Muscle Leg	muscle
15	chr11:72628800-72649000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr11:72630800-72662400	Weak transcription	Sigmoid Colon	Sigmoid Colon
17	chr11:72631200-72643200	Weak transcription	Placenta	Placenta
18	chr11:72631600-72646400	Weak transcription	Small Intestine	intestine
19	chr11:72632800-72640400	Weak transcription	Brain Inferior Temporal Lobe	brain
20	chr11:72632800-72640400	Weak transcription	Brain Substantia Nigra	brain
21	chr11:72632800-72640800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr11:72632800-72640800	Weak transcription	Fetal Heart	heart
23	chr11:72633000-72640400	Weak transcription	Brain Cingulate Gyrus	brain
24	chr11:72633000-72640800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr11:72633000-72643200	Weak transcription	NHEK	skin
26	chr11:72633000-72645400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
27	chr11:72633000-72648600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
28	chr11:72633000-72654400	Weak transcription	Primary T cells fromperipheralblood	blood
29	chr11:72633000-72680000	Weak transcription	Dnd41	blood
30	chr11:72633000-72684000	Weak transcription	Primary T cells from cord blood	blood
31	chr11:72633200-72651600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
32	chr11:72633200-72668400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
33	chr11:72633400-72640800	Weak transcription	Brain Angular Gyrus	brain
34	chr11:72633400-72646800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr11:72633400-72679400	Weak transcription	Fetal Thymus	thymus
36	chr11:72634000-72648600	Weak transcription	HepG2	liver
37	chr11:72636200-72640400	Weak transcription	Primary neutrophils fromperipheralblood	blood
38	chr11:72636200-72640600	Weak transcription	Brain Anterior Caudate	brain
39	chr11:72636200-72643200	Weak transcription	Muscle Satellite Cultured Cells	--
40	chr11:72636200-72694800	Weak transcription	Adipose Nuclei	Adipose
41	chr11:72636400-72642800	Weak transcription	HUVEC	blood vessel
42	chr11:72636400-72680200	Weak transcription	Primary T helper cells PMA-I stimulated	--
43	chr11:72636400-72712600	Weak transcription	Duodenum Smooth Muscle	Duodenum
44	chr11:72636600-72640800	Weak transcription	Osteobl	bone
45	chr11:72636600-72645800	Weak transcription	Monocytes-CD14+_RO01746	blood
46	chr11:72636800-72640400	Weak transcription	Liver	Liver
47	chr11:72637000-72721600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
48	chr11:72637200-72653200	Weak transcription	Psoas Muscle	Psoas
49	chr11:72637400-72666000	Weak transcription	Ovary	ovary
50	chr11:72637400-72666400	Weak transcription	Right Ventricle	heart

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