Variant report

Variant rs712675
Chromosome Location chr5:111753343-111753344
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:111728800-111753600 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr5:111730400-111753800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr5:111732000-111753400 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr5:111743200-111753400 Weak transcription Placenta Placenta
5 chr5:111743600-111753400 Weak transcription Brain Substantia Nigra brain
6 chr5:111746200-111753400 Weak transcription Right Ventricle heart
7 chr5:111746600-111753800 Weak transcription Spleen Spleen
8 chr5:111748000-111753600 Weak transcription Pancreas Pancrea
9 chr5:111748000-111754200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr5:111748200-111753400 Weak transcription Fetal Lung lung
11 chr5:111748600-111753600 Weak transcription Left Ventricle heart
12 chr5:111749400-111753400 Weak transcription Fetal Kidney kidney
13 chr5:111749400-111753600 Weak transcription Lung lung
14 chr5:111749600-111753600 Weak transcription Esophagus oesophagus
15 chr5:111749600-111753600 Weak transcription Gastric stomach
16 chr5:111749600-111753600 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr5:111749800-111753400 Weak transcription NHEK skin
18 chr5:111749800-111753600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr5:111750400-111753400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr5:111751600-111753400 Weak transcription Ovary ovary
21 chr5:111752200-111753600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
22 chr5:111752400-111753400 Enhancers Cortex derived primary cultured neurospheres brain
23 chr5:111752400-111754000 Active TSS Fetal Brain Female brain
24 chr5:111752600-111753400 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr5:111752600-111753400 Active TSS Adipose Nuclei Adipose
26 chr5:111752600-111753400 Weak transcription Brain Anterior Caudate brain
27 chr5:111752600-111753400 Enhancers Hela-S3 cervix
28 chr5:111752600-111753600 Enhancers Brain Germinal Matrix brain
29 chr5:111752800-111754200 Flanking Active TSS Fetal Brain Male brain
30 chr5:111752800-111755200 Active TSS Psoas Muscle Psoas
31 chr5:111752800-111756200 Active TSS Right Atrium heart
32 chr5:111752800-111756400 Active TSS Aorta Aorta
33 chr5:111753000-111753400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr5:111753000-111753600 Flanking Bivalent TSS/Enh hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr5:111753000-111753600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr5:111753000-111754400 Flanking Active TSS HUVEC blood vessel
37 chr5:111753000-111756400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr5:111753000-111756600 Active TSS Pancreatic Islets Pancreatic Islet
39 chr5:111753200-111753400 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
40 chr5:111753200-111753400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
41 chr5:111753200-111753400 Enhancers Brain Hippocampus Middle brain
42 chr5:111753200-111756400 Active TSS Fetal Heart heart

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