Variant report

Variant rs71316742
Chromosome Location chr22:22654384-22654385
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:22653000-22658800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr22:22653000-22658800 Weak transcription Lung lung
3 chr22:22653000-22658800 Weak transcription Spleen Spleen
4 chr22:22653000-22659400 Weak transcription Esophagus oesophagus
5 chr22:22653000-22660200 Weak transcription Gastric stomach
6 chr22:22653000-22664200 Weak transcription Aorta Aorta
7 chr22:22653000-22664200 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr22:22653000-22672400 Weak transcription Placenta Amnion Placenta Amnion
9 chr22:22653000-22675600 Weak transcription Small Intestine intestine
10 chr22:22653000-22676800 Weak transcription Stomach Mucosa stomach
11 chr22:22653000-22677400 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr22:22653200-22658600 Weak transcription Fetal Intestine Large intestine
13 chr22:22653200-22658600 Weak transcription Left Ventricle heart
14 chr22:22653200-22658800 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr22:22653200-22658800 Weak transcription Brain Cingulate Gyrus brain
16 chr22:22653200-22658800 Weak transcription Placenta Placenta
17 chr22:22653200-22658800 Weak transcription Ovary ovary
18 chr22:22653200-22658800 Weak transcription Thymus Thymus
19 chr22:22653200-22659400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr22:22653200-22659800 Weak transcription Fetal Lung lung
21 chr22:22653200-22660000 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr22:22653200-22662600 Weak transcription Fetal Intestine Small intestine
23 chr22:22653200-22664200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr22:22653200-22669400 Weak transcription Fetal Thymus thymus
25 chr22:22653200-22671600 Weak transcription Fetal Kidney kidney
26 chr22:22653200-22671800 Weak transcription Brain Substantia Nigra brain
27 chr22:22653200-22673000 Weak transcription Colonic Mucosa Colon
28 chr22:22653200-22676800 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr22:22653400-22658800 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr22:22653400-22660000 Weak transcription Brain Germinal Matrix brain
31 chr22:22653400-22670400 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr22:22653400-22671000 Weak transcription H9 Cell Line embryonic stem cell
33 chr22:22653800-22654400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
34 chr22:22653800-22654400 Enhancers HepG2 liver
35 chr22:22653800-22658400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr22:22653800-22658400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr22:22653800-22658600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr22:22653800-22658600 Weak transcription Primary monocytes fromperipheralblood blood
39 chr22:22653800-22658600 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr22:22653800-22658600 Weak transcription Adipose Nuclei Adipose
41 chr22:22653800-22658600 Weak transcription Brain Anterior Caudate brain
42 chr22:22653800-22658600 Weak transcription Brain Hippocampus Middle brain
43 chr22:22653800-22658600 Weak transcription Fetal Brain Female brain
44 chr22:22653800-22658600 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr22:22653800-22658600 Weak transcription Stomach Smooth Muscle stomach
46 chr22:22653800-22658600 Weak transcription HSMM muscle
47 chr22:22653800-22658800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr22:22653800-22658800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr22:22653800-22658800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr22:22653800-22658800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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