The 2.0 version of rSNPBase

Variant report

Variant rs71385189
Chromosome Location chr16:12182179-12182180
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:12117400-12183400 Weak transcription Rectal Smooth Muscle rectum
2 chr16:12142800-12189200 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr16:12146000-12183400 Weak transcription Fetal Intestine Large intestine
4 chr16:12148000-12183400 Weak transcription Fetal Lung lung
5 chr16:12156000-12185800 Weak transcription Brain Germinal Matrix brain
6 chr16:12156000-12185800 Weak transcription Fetal Brain Female brain
7 chr16:12157200-12183200 Weak transcription NHLF lung
8 chr16:12157200-12185800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr16:12157800-12185800 Weak transcription HSMMtube muscle
10 chr16:12163600-12183600 Weak transcription Colon Smooth Muscle Colon
11 chr16:12167600-12185800 Weak transcription HSMM muscle
12 chr16:12170000-12183400 Weak transcription HepG2 liver
13 chr16:12170200-12183400 Weak transcription Colonic Mucosa Colon
14 chr16:12173400-12183200 Weak transcription Liver Liver
15 chr16:12173600-12182800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr16:12173600-12183400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr16:12173600-12183400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr16:12173800-12183200 Weak transcription Brain Hippocampus Middle brain
19 chr16:12173800-12183400 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr16:12173800-12183400 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr16:12174200-12183000 Weak transcription HUVEC blood vessel
22 chr16:12174200-12183200 Weak transcription Osteobl bone
23 chr16:12174200-12183400 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr16:12174400-12182400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr16:12174400-12183200 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr16:12175200-12185000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr16:12175400-12183200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr16:12175600-12183200 Weak transcription Fetal Intestine Small intestine
29 chr16:12175600-12183400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr16:12175800-12183200 Weak transcription NH-A brain
31 chr16:12176000-12183400 Weak transcription Primary neutrophils fromperipheralblood blood
32 chr16:12176200-12183200 Weak transcription Fetal Kidney kidney
33 chr16:12176200-12183200 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr16:12176400-12183200 Weak transcription NHDF-Ad bronchial
35 chr16:12176400-12183400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr16:12176600-12183400 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr16:12176800-12183000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr16:12177600-12183000 Weak transcription Primary hematopoietic stem cells blood
39 chr16:12177800-12182800 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr16:12177800-12182800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr16:12177800-12182800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr16:12178000-12183200 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr16:12178000-12183400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr16:12178000-12183400 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr16:12178000-12183400 Weak transcription Stomach Smooth Muscle stomach
46 chr16:12178600-12183000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr16:12178600-12183000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
48 chr16:12178600-12183200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr16:12178600-12199600 Weak transcription Aorta Aorta
50 chr16:12179200-12183400 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015