Variant report

Variant	rs71405769
Chromosome Location	chr14:36974768-36974769
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs2076735	0.85[ASN][1000 genomes]
rs4902714	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040256	chr14:36501452-37172046	Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
2	nsv542040	chr14:36501452-37172046	Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
3	nsv1047290	chr14:36564568-37445157	Weak transcription Enhancers Bivalent/Poised TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	43 gene(s)	inside rSNPs	diseases
4	nsv1037952	chr14:36670484-37294692	Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
5	nsv542042	chr14:36670484-37294692	Weak transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
6	nsv1053685	chr14:36915643-37245920	Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
7	nsv917279	chr14:36953511-37146655	Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
8	nsv977584	chr14:36972742-36978499	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:36972400-36975000	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
2	chr14:36972800-36974800	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
3	chr14:36973200-36974800	Bivalent Enhancer	Liver	Liver
4	chr14:36973200-36975000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr14:36973200-36975000	Bivalent Enhancer	Adipose Nuclei	Adipose
6	chr14:36973600-36974800	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
7	chr14:36973600-36975000	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr14:36973800-36974800	Weak transcription	Pancreas	Pancrea
9	chr14:36973800-36975600	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr14:36973800-36975600	Bivalent Enhancer	Brain Germinal Matrix	brain
11	chr14:36973800-36978000	Weak transcription	Right Atrium	heart
12	chr14:36974000-36975000	Bivalent Enhancer	Primary T helper naive cells fromperipheralblood	blood
13	chr14:36974000-36975600	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
14	chr14:36974000-36975600	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
15	chr14:36974200-36975000	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
16	chr14:36974400-36974800	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
17	chr14:36974400-36974800	Bivalent/Poised TSS	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr14:36974400-36975000	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
19	chr14:36974400-36975000	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
20	chr14:36974400-36975000	Bivalent Enhancer	Primary T cells effector/memory enriched fromperipheralblood	blood
21	chr14:36974400-36975200	Enhancers	Spleen	Spleen
22	chr14:36974400-36975400	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
23	chr14:36974400-36975600	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
24	chr14:36974600-36974800	Bivalent/Poised TSS	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr14:36974600-36974800	Bivalent Enhancer	Fetal Heart	heart
26	chr14:36974600-36974800	Bivalent Enhancer	Left Ventricle	heart
27	chr14:36974600-36974800	Bivalent Enhancer	Stomach Smooth Muscle	stomach
28	chr14:36974600-36975000	Bivalent Enhancer	Colonic Mucosa	Colon
29	chr14:36974600-36975000	Bivalent Enhancer	Placenta Amnion	Placenta Amnion
30	chr14:36974600-36975200	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
31	chr14:36974600-36975400	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr14:36974600-36975600	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
33	chr14:36974600-36975600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
34	chr14:36974600-36976000	ZNF genes & repeats	Lung	lung

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