Variant report

Variant	rs71428959
Chromosome Location	chr2:167845168-167845169
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529384	chr2:167143465-167958752	Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv508177	chr2:167840473-167871677	Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv3019	chr2:167843982-167870745	Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv875376	chr2:167844513-168037489	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	esv2512957	chr2:167844585-167852104	Flanking Active TSS Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases
6	esv2390072	chr2:167844774-167851400	Flanking Active TSS Active TSS Enhancers	n/a	n/a	inside rSNPs	diseases
7	esv3458638	chr2:167844841-167851305	Active TSS Enhancers	n/a	n/a	inside rSNPs	diseases
8	esv3458639	chr2:167844882-167851280	Active TSS Enhancers	n/a	n/a	inside rSNPs	diseases
9	esv3458640	chr2:167844895-167851236	Active TSS Enhancers	n/a	n/a	inside rSNPs	diseases
10	esv3458637	chr2:167844937-167851216	Active TSS Enhancers	n/a	n/a	inside rSNPs	diseases
11	nsv498943	chr2:167844952-167851218	Active TSS Enhancers	n/a	n/a	inside rSNPs	diseases
12	esv3458642	chr2:167844953-167851218	Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:167844400-167845200	Active TSS	HUES6 Cell Line	embryonic stem cell
2	chr2:167844600-167845200	Active TSS	H9 Cell Line	embryonic stem cell
3	chr2:167844800-167845200	Active TSS	ES-I3 Cell Line	embryonic stem cell
4	chr2:167844800-167845200	Active TSS	iPS-15b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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