| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1043936 |
chr12:21562673-21979030 |
ZNF genes & repeats Enhancers Weak transcription Active TSS Strong transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
46 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv557741 |
chr12:21578559-22169854 |
Strong transcription Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
50 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv469164 |
chr12:21688900-21966701 |
Weak transcription Bivalent/Poised TSS Strong transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv557744 |
chr12:21688900-21966701 |
Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv832349 |
chr12:21749093-21930695 |
Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Active TSS Genic enhancers Enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
esv12759 |
chr12:21815499-21816988 |
Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv557746 |
chr12:21815529-21816272 |
Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv557747 |
chr12:21815529-21816447 |
Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv557748 |
chr12:21815529-21816831 |
Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Enhancers
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv557749 |
chr12:21815631-21816831 |
Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS
|
TF binding regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
nsv557750 |
chr12:21815734-21816831 |
Active TSS Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 12 |
nsv557751 |
chr12:21815898-21816831 |
Enhancers Bivalent/Poised TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 13 |
nsv557752 |
chr12:21815979-21816742 |
Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 14 |
nsv557753 |
chr12:21815979-21816831 |
Bivalent/Poised TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page:
1
