Variant report

Variant	rs71453665
Chromosome Location	chr12:9215190-9215191
allele	-/ATA
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832327	chr12:9081779-9246220	Active TSS Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
2	nsv1045317	chr12:9113216-9544655	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	38 gene(s)	inside rSNPs	diseases
3	nsv898738	chr12:9205030-9274394	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
4	nsv1048491	chr12:9208806-9544655	Strong transcription Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
5	esv3348319	chr12:9214085-9216383	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS	TF binding region Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
6	esv3323686	chr12:9214285-9215983	Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
7	esv1651113	chr12:9215189-9215192	Weak transcription Strong transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:9178400-9216400	Weak transcription	Primary hematopoietic stem cells	blood
2	chr12:9199600-9216200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
3	chr12:9199800-9216200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
4	chr12:9199800-9216200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr12:9199800-9216600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
6	chr12:9200000-9216000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
7	chr12:9200000-9216200	Weak transcription	Primary T helper cells PMA-I stimulated	--
8	chr12:9200000-9216200	Weak transcription	Primary T helper cells fromperipheralblood	blood
9	chr12:9200000-9216200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
10	chr12:9202000-9216600	Weak transcription	Left Ventricle	heart
11	chr12:9202200-9216200	Weak transcription	Primary T cells from cord blood	blood
12	chr12:9202200-9216200	Weak transcription	Adipose Nuclei	Adipose
13	chr12:9202400-9216000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
14	chr12:9204200-9216800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
15	chr12:9211200-9216600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
16	chr12:9213600-9216200	Weak transcription	Duodenum Mucosa	Duodenum
17	chr12:9214600-9216800	Weak transcription	Primary T cells fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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