Variant report

Variant rs71457116
Chromosome Location chr12:12177614-12177615
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:12164800-12179800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr12:12170600-12177800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr12:12170800-12179200 Weak transcription H9 Cell Line embryonic stem cell
4 chr12:12171200-12185400 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr12:12171400-12185200 Weak transcription Spleen Spleen
6 chr12:12171800-12185000 Weak transcription Esophagus oesophagus
7 chr12:12172200-12184600 Weak transcription Thymus Thymus
8 chr12:12173200-12178200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr12:12175400-12179000 Enhancers Fetal Thymus thymus
10 chr12:12175600-12185400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr12:12175800-12177800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr12:12175800-12178600 Flanking Active TSS GM12878-XiMat blood
13 chr12:12176000-12177800 Enhancers Primary T helper cells PMA-I stimulated --
14 chr12:12176000-12178400 Enhancers Primary B cells from cord blood blood
15 chr12:12176400-12177800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
16 chr12:12176400-12178000 Enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr12:12176400-12179200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
18 chr12:12176600-12179000 Enhancers Primary B cells from peripheral blood blood
19 chr12:12176600-12179000 Enhancers Primary T helper cells fromperipheralblood blood
20 chr12:12176800-12178600 Enhancers Primary T helper naive cells fromperipheralblood blood
21 chr12:12177000-12177800 Enhancers Primary T helper naive cells from peripheral blood blood
22 chr12:12177000-12179000 Enhancers Primary T cells fromperipheralblood blood
23 chr12:12177200-12178400 Enhancers Primary T killer memory cells from peripheral blood blood
24 chr12:12177200-12179000 Enhancers Duodenum Mucosa Duodenum
25 chr12:12177400-12177800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr12:12177400-12178600 Enhancers Colonic Mucosa Colon
27 chr12:12177400-12178600 Enhancers Stomach Mucosa stomach
28 chr12:12177600-12178000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
29 chr12:12177600-12178400 Enhancers Primary monocytes fromperipheralblood blood
30 chr12:12177600-12178400 Enhancers Primary T regulatory cells fromperipheralblood blood
31 chr12:12177600-12178400 Enhancers Monocytes-CD14+_RO01746 blood
32 chr12:12177600-12178600 Enhancers Primary hematopoietic stem cells short term culture blood
33 chr12:12177600-12179200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
34 chr12:12177600-12179600 Enhancers Rectal Mucosa Donor 31 rectum

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