Variant report

Variant	rs7146286
Chromosome Location	chr14:77460493-77460494
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:77418411..77421208-chr14:77460333..77461971,2	MCF-7	breast:
2	chr14:77460114..77462565-chr14:77505346..77507230,2	K562	blood:
3	chr14:77460054..77462541-chr14:77469440..77471746,2	MCF-7	breast:
4	chr14:77457947..77460868-chr14:77463811..77465511,2	MCF-7	breast:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs11159244	0.84[ASN][1000 genomes]
rs1990737	0.82[EUR][1000 genomes]
rs2363510	0.90[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2885801	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4899632	0.81[ASN][1000 genomes]
rs4903525	0.98[ASN][1000 genomes]
rs4903530	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431017	chr14:76938089-77854647	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	107 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:77444600-77460800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr14:77451400-77466800	Weak transcription	Right Atrium	heart
3	chr14:77451600-77460800	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr14:77452000-77461600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr14:77452400-77466800	Weak transcription	HSMMtube	muscle
6	chr14:77452800-77462800	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr14:77453000-77464000	Weak transcription	Fetal Muscle Leg	muscle
8	chr14:77454600-77460600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
9	chr14:77454600-77460800	Weak transcription	HUES48 Cell Line	embryonic stem cell
10	chr14:77454600-77460800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr14:77454800-77462200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
12	chr14:77459000-77460800	Weak transcription	Pancreas	Pancrea
13	chr14:77459800-77461000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr14:77459800-77462800	Enhancers	Fetal Thymus	thymus
15	chr14:77460000-77462400	Enhancers	GM12878-XiMat	blood
16	chr14:77460000-77464000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr14:77460000-77464200	Enhancers	H1 Cell Line	embryonic stem cell
18	chr14:77460000-77464200	Enhancers	HUES6 Cell Line	embryonic stem cell
19	chr14:77460000-77466800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr14:77460000-77467400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
21	chr14:77460200-77461000	Enhancers	Aorta	Aorta
22	chr14:77460200-77461000	Enhancers	NHDF-Ad	bronchial
23	chr14:77460200-77461400	Weak transcription	Fetal Heart	heart
24	chr14:77460200-77463600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr14:77460200-77464000	Enhancers	iPS-15b Cell Line	embryonic stem cell
26	chr14:77460200-77464200	Enhancers	ES-I3 Cell Line	embryonic stem cell
27	chr14:77460200-77464200	Enhancers	iPS-18 Cell Line	embryonic stem cell
28	chr14:77460200-77464200	Enhancers	iPS-20b Cell Line	embryonic stem cell
29	chr14:77460400-77460600	Weak transcription	Fetal Muscle Trunk	muscle
30	chr14:77460400-77461600	Weak transcription	Placenta Amnion	Placenta Amnion
31	chr14:77460400-77465400	Weak transcription	Spleen	Spleen

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